Petromyzon marinus (sea lamprey): 116947956
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Entry
116947956 CDS
T09614
Name
(RefSeq) ATP-dependent translocase ABCB1-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116947956
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmrn02000
]
116947956
04147 Exosome [BR:
pmrn04147
]
116947956
04090 CD molecules [BR:
pmrn04090
]
116947956
Enzymes [BR:
pmrn01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
116947956
Transporters [BR:
pmrn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
116947956
Exosome [BR:
pmrn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116947956
CD molecules [BR:
pmrn04090
]
Proteins
116947956
BRITE hierarchy
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
Rad17
AAA_29
AAA_21
ABC_ATPase
AAA_30
AAA_5
Zeta_toxin
RsgA_GTPase
AAA_18
APS_kinase
AAA_33
AAA_7
DUF5906
SbcC_Walker_B
AAA_14
AAA_28
Rop-like
AAA_15
FumaraseC_C
Dsc3_C
Motif
Other DBs
NCBI-GeneID:
116947956
NCBI-ProteinID:
XP_032820194
EnsemblRapid:
ENSPMAG00000001622
LinkDB
All DBs
Position
31:complement(2966653..3006824)
Genome browser
AA seq
1184 aa
AA seq
DB search
MTEYAYSFMGGGAAVMVLGTVQVACWAAAGARQAHRVRRLLFRSILRQDAAWFDSSQAGE
LGNCLTDNVMKMQDGMSDQVSVMLQLVVRFAAGLGVGFSQGWKLTLVIMAVSPLIAGTAG
AVYLASTALSRKELAAYGQAGAIASEVLSNIRTVVAFGGEAREVERYSRSLAPASKMGLR
KSFINGFGIGMTMLVVYGTYGLAFWYGTTLVLDPNSDDYTVGTLITVFFSVLIGASSLGE
AASQMEYISTARAAATPVLAMIKRTPAIDSAAESGRRPSSTQGHIRFRALKFSYPTRPDV
QVLNGLDLEVRPGQSVALVGPSGCGKSTCVQLLQRLYDPQEGQVLLDGDDVRELNVHWLR
ERVAVVSQEPVLFGCSVAENIAYGREGVSRGDVERAAREAYAYDFIAALPEGFETPVGER
GTQLSGGQKQRIAIARALVRDPRVLVLDEATSALDTASEGIVQAALDRARRGRTTLVIAH
RLSTVQSADTIAVLEGGAVAEMGSHEELLQRRGMYFNLTQAQSSGKDAGGVAEPPRENRD
ASAEEGPGDRPALTDIPAPVARTDKGASPDDSEGIEELTVAAGDGNDKEEQKEEEDEKKA
ARGISFLQMLRLNAPEWPYILLGIMVAAVNGAIQPVFAIIFAELIGTFTLPTEEEQREKS
VFWCLMFIAIGGSALVVNIIQGYTFGKSGEVLTRRLRERSFKAMVRQEISWFDNHKNNTG
ALTAQLSTDAAQVQGATGRRAGMLVQNVSGLATGLLIALLVGWKLALLMLAFMPFMVGAG
LVQSVLQGSEATTIKRAYEQASKISTEAVQNIRTVASLCLEEKFSGMFEQCLLEPYRVIK
RRGYLFSVTFGFTQGILCFAYAAVFRLGGFLVAQGELTFQDVYKVFGAIIFGALAVGQAM
AMAPNYGRAKVSAARILALLRREMAIDSYSEGGIQPDAFDGELQLSGVHFRYPTRPHAEV
LRGVSLRVAPGQTLALVGPSGSGKSTIMQLLLRFYDSSAGQLLLNGVEVRQLNLGWLRRQ
LGVVSQEPVLFGCSIAENIAYGDVSRAVSRDEVVAAARAANLHDFVESLPQAYDTVVGER
GAQLSGGQKQRVAIARALLRDPRVLLLDEATSALDAESEKVVQDALEKAQQGRTCIVIAH
RLSTVRAADVIAVLQDGDICELGSHEELLSARGLYYRLVEAQIL
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgacggagtacgcctactccttcatgggcggcggcgcggccgtgatggtgctgggcacg
gtacaggtggcgtgctgggcggcggcgggcgcgcgccaggctcaccgcgtgcgccggctc
ctcttccgctccatcctgcggcaggacgctgcctggttcgactcgagccaagccggcgag
ctcggcaactgtctcaccgacaacgtgatgaagatgcaggacggcatgagcgaccaggtg
agcgtcatgctgcagctcgtcgtgaggtttgcggccggcctgggcgtcggcttctcgcag
ggatggaagctcactctcgtcatcatggccgtcagccccctcatcgccggcaccgccggc
gccgtctacctggcgtcgacggcgttgagcaggaaggagctggcggcgtacgggcaggcg
ggagccatcgcaagcgaggttctctccaacatccgcaccgtcgtggcgttcggaggggag
gcgcgggaggtggagcggtacagccggagcctggcgcctgcgagcaagatggggctgcgc
aagagcttcatcaacggcttcggcatcgggatgacgatgctggtcgtgtacgggacgtac
ggcctcgcgttctggtacggcaccacgctggtgctggacccaaacagcgacgactacacg
gttggcacgctcatcacggtgttcttctcggtgctgatcggcgcgtcctcgctgggggag
gccgccagccagatggagtacatctcgacggcccgtgccgccgccacccccgtgctggcg
atgatcaagcgcacgccggccatcgacagcgccgccgagtcggggcgccggccctcgtcc
acccaggggcacatccgcttcagggccctcaagttcagctacccgactcgccccgacgtg
caggttctgaatgggctggatttggaggtgcggccgggacagtcggtggcgctggtgggg
cccagcggctgtggaaagagcacctgcgtgcagctgctgcagagactctacgatccccag
gaggggcaggtcctgctggacggcgacgacgtgcgggagctgaacgtgcactggctgcgg
gagcgagtggcggtcgtgtcgcaggagccggtgctcttcggctgctccgtcgccgagaac
atcgcgtacgggcgcgagggcgtgagccgcggcgacgtggagcgagcggcgcgtgaggcc
tacgcctacgacttcatcgcggcgctgccggaggggttcgagacgccggtgggggagcgc
gggacgcagctgagcggcgggcagaagcagcgcatcgccatcgcgcgcgcgctcgtgcgc
gacccgcgcgtgctcgtactggacgaggctacgtcggcgctcgacacggccagtgagggc
attgtgcaggccgccctcgaccgggctcgccgtggccgcaccacgctggtgatcgctcac
cgcctctccacggtgcagagcgccgacaccatcgccgtgctggagggcggcgccgtggcc
gagatgggcagccacgaggagctgctgcagcgccgggggatgtacttcaacctcacccag
gcgcagtcgagcgggaaggacgcgggtggagtcgctgagccgccgcgtgagaaccgcgat
gcgagcgcggaagagggtcccggcgaccgcccggcgctcacggacatccccgcgcccgtc
gctcgcacggacaagggggcttcaccggacgatagcgaggggattgaggagctcacggtg
gcggctggagatggcaacgacaaggaggagcagaaggaggaggaggatgagaagaaggcg
gcgcgagggatctctttcctgcagatgctgaggctcaacgctcccgagtggccatacata
ttgctgggcatcatggtggcagcagtgaacggcgccatccagccggtcttcgccatcatc
ttcgccgagctgatcgggacgttcacgctgcccacggaagaggagcagagggagaaatcg
gtcttctggtgcctcatgttcatcgccatcggagggtcagccttagtggtgaacatcata
cagggctacacgtttgggaagtccggcgaggtgctgacacggaggctccgtgagcggagc
ttcaaagcgatggtcagacaggagatcagctggttcgacaatcacaagaacaacaccggc
gcgctgacggcgcagctgtccaccgacgcggcgcaggtccagggggcgacaggccggcgg
gccggcatgctggtgcagaacgtctcggggctggccacgggcctgctgatcgcgctgctc
gtgggctggaagctggcgctgctcatgctcgccttcatgcccttcatggtgggcgcgggc
ctcgtgcagagcgtcctgcagggctccgaggccaccaccatcaagcgggcgtacgagcag
gccagcaagatctccaccgaggccgtgcagaacatccggacggtggcgtccctgtgcctc
gaggagaagttcagcggaatgttcgagcagtgtctcctcgagccgtacagggtcataaag
cgcaggggctacctcttcagcgtcaccttcggcttcacccagggcatcctgtgcttcgcg
tacgcggccgtcttccgcctgggcgggttcctcgtggcccagggggagctcaccttccag
gacgtctacaaggtgttcggtgccatcattttcggcgccttggcggtgggccaggccatg
gcgatggcgcccaactacggccgagccaaggtgtcggcggctcgaatcctggccctgctg
cggcgcgagatggccattgacagctacagcgagggcggcatccagccggacgccttcgac
ggggagctgcagctgagcggcgtgcacttccgctacccgacgcggccgcacgccgaggtg
ctgcgcggcgtgagcctgcgcgtggccccgggccagaccctggccctggtgggtcccagc
ggcagcggcaagagcaccatcatgcagctgctgctgcgcttctacgactccagcgccggc
cagctgcttctgaacggcgtggaggtgaggcagctgaacctgggctggctgcgccggcag
ctgggcgtcgtgtcgcaggagccggtgctgttcggctgctccatcgccgagaacatcgcg
tacggcgacgtgagccgtgcggtgtcgcgcgacgaggtcgtcgccgccgcccgagccgcc
aacctccacgacttcgtcgagtccctgccgcaggcgtacgacacggtggttggcgagcgt
ggcgcccagctctccggcgggcagaagcagcgcgtggcgatcgcgcgtgcgctcctccgg
gacccccgcgtgctgctgctggacgaggccacgtccgcgctggacgccgagagcgagaag
gtggtgcaggacgctctggagaaagctcagcagggccgcacctgcatcgtcatcgctcac
cggctgtcgacggtgcgcgcggcggacgtgatcgcggtgctgcaggacggcgacatctgt
gagctgggctcgcatgaggagctgctgtccgcccggggcctctactaccgcctcgtggag
gcccagatcctgtag
DBGET
integrated database retrieval system
