Petromyzon marinus (sea lamprey): 116950538
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Entry
116950538 CDS
T09614
Symbol
USP48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmrn01002
]
116950538 (USP48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmrn04121
]
116950538 (USP48)
Enzymes [BR:
pmrn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116950538 (USP48)
Peptidases and inhibitors [BR:
pmrn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116950538 (USP48)
Ubiquitin system [BR:
pmrn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116950538 (USP48)
BRITE hierarchy
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
DMSP_lyase
Actin_micro
Motif
Other DBs
NCBI-GeneID:
116950538
NCBI-ProteinID:
XP_032824287
EnsemblRapid:
ENSPMAG00000026311
LinkDB
All DBs
Position
39:complement(10214347..10256689)
Genome browser
AA seq
1110 aa
AA seq
DB search
MGPKARASRGTAGDRGWAWVVSVGPEAVGPAHLHLAYRLALPPCASGGPRRNCKGNPNCL
VGLGEQAWLGDLNEEAFHQVDDPDTERRAKNSFVGLKNLGATCYVNTFLQVWFHNHRFRQ
LLYLYRPDSPSTHAGTTTSCSTTTAATATSITTKDGATTDSETTDRTTITSSASTMPQGA
TDSSNPAGQEQGGVCEHLQLLFALLQESERRYLDPSPFIRALGLDTAQQQDAQEFSKLLM
ALLEDALSRQRDSRVRDLVQSEFCGQYAYVTTCGACGHESRRPARFLELDLNIQGHKQLT
DCLDEFLKEEKLEGENRYLCGRCQVKQTASRRIQLLGLPRTLNLQLLRFVFDRQTGHKKK
LNSYLSFPETLDMRPYLQHGSGEGEYELSAVLIHRGVSAYSGHYIAHIRDARTGEWHKFN
DDEIERVEGRHLLLGAEDDLEPSRSVGRRPKCVRGVHSSRNAYSLVYTVRGEPTPTAQDT
TLPEWLAEKVRADNRAFEEWCEEMSAMRQQSIAEGRAKHSEVRSLYALLPADNASEFEFV
GTAWLRQWLTDSACVRALDNAAFVCTHGALSPHHVGSVKRISRGAANALYHKYGGGPRLT
EASLCRDCVVERCRVLQLKSRLSDDYRTVSTLLKSSLPPGEAFWVGKVSLRSWRLLVIGQ
FEDKEEESKPSNGGGERSSDEAEPEPAESVPAGARTARSSAEEDGGFNDEVLCPHGGLST
REGERRLVSAEVWHKLRGYFPSAPEFRSDAQPCAQCQRLEREGEETGEMQRMIATEQKGA
LTALFQDKGRPTLQPWPQDTETLYVVSQYFLDEWRKFIRRPTRASPVFSVGNSTLLCPHS
GLMFTPDSVSHEDASLLALVWPPEWDVISRSFQVDLAITITRRPCGEGSSEAASAYITQP
GVCVECQAARRSQQQRDQQEYTQATVYVRKVVKDFKVMKEAVPELTQSGSEPEEVMEGTD
EGVQGEKDPDFSQQANGLKRRRVSPLEGPGSAAAAAAAAEAAAAAAVRRSARHRRVRGEK
GLVVSARQTLRELKIQIMHAFSVAPFDQNLSVDGRILSDDSASLGHLGVLPNSVILLQAD
EPIADYSSIDDITQVCLPEEGFKGTGLLGH
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggggcctaaggcgcgcgcctcccgcggcaccgcgggcgaccgcggctgggcctgggtc
gtgagcgtggggcccgaggccgtggggcccgcgcacctgcacctcgcctaccgcctcgcg
ctgccgccctgcgcctcgggcggcccccggaggaactgcaaggggaaccccaactgcctg
gtggggctgggcgagcaagcgtggctgggcgacctcaatgaggaggccttccaccaggtg
gacgatccagatacggaacgccgcgccaagaactcgttcgtggggctcaagaacctgggg
gcgacgtgctacgtgaacactttcctgcaggtgtggttccacaaccaccgcttccgccag
ttgctctacctctaccgcccagactccccctccacccacgcggggacgactacctcctgc
tccaccaccaccgccgccaccgccaccagcatcaccaccaaggatggggcgactacggat
agtgaaaccaccgacaggacgacaatcacttcctccgcctccacgatgccccaaggcgcc
acagactccagcaacccggcaggacaggagcagggcggcgtgtgcgagcacctgcagctg
ctctttgcgctgttgcaggagagcgaacgccgctacctcgatccctcgcccttcatccgt
gccctcggactcgacaccgcccagcagcaggacgcgcaggaattctcgaagctgctcatg
gcgctgctggaggacgccctgagccggcagcgcgactcccgcgtgcgcgacctggtgcag
agcgagttctgcgggcagtacgcgtacgtcaccacgtgcggtgcgtgtgggcacgagtcg
aggcgcccggcgcggttcctggagctcgacctcaacatccagggtcacaaacagctgacg
gactgccttgatgagttcctcaaggaggagaagctggagggagagaaccgctacctgtgc
gggcgctgccaggtgaagcagacggcgtcgcgccgcattcagctcctcggccttccccgc
accctcaacctgcagctcctgcgctttgtgttcgaccggcaaaccgggcacaagaagaag
ctcaactcgtacctgagcttcccggagacgctggacatgaggccatacctgcagcatggc
agcggcgagggtgagtacgagctgagcgcggtgctcatccaccgcggggtcagcgcctac
tcgggccactacatcgcgcacatccgcgacgcgcgcacgggcgagtggcacaagttcaac
gacgacgagatcgagcgcgtcgaaggcaggcacctgctgctgggcgccgaggacgacctc
gagccgtctcgctcggtggggcggagacccaagtgcgtgcgcggagttcactcgtcacgc
aacgcgtactcgctggtgtacaccgtgcgcggagagcccacgcccaccgcacaggacacc
acgctgcccgagtggctggcggagaaggttcgggcagacaaccgcgcgtttgaggagtgg
tgcgaggaaatgagcgccatgcggcagcagagcattgccgagggtcgcgccaaacactcg
gaggtgcgcagcctctacgccctgctgccggcggacaacgcgagcgagtttgagtttgtg
gggacggcgtggctgcggcagtggctgacggacagcgcgtgcgtgcgtgcgctggacaac
gccgcgttcgtgtgcacgcacggcgccctctcgccgcaccacgtgggcagcgtcaagagg
atcagccgtggcgccgccaacgccctgtaccacaagtacggcggcggcccgcgactcact
gaagcgtcgctgtgccgtgactgtgtggtggagcgctgccgggtgctgcagctcaagagc
cgactcagcgacgactaccgcaccgtcagcacactgctcaagagctccctgcctcccggc
gaggcattctgggtgggcaaggtgtccctgcggagctggcggctgctcgtgattggtcag
ttcgaggacaaggaggaggagtccaagccgagcaacgggggcggggagcggagcagcgac
gaggcggagccggagccggcggagagcgttcccgcaggcgcgaggacggcccggtcgtct
gcggaggaggacggtggcttcaacgacgaggtcttgtgcccacacggagggttgagcacg
cgggagggcgagcgccgcctcgtctcggccgaggtttggcacaaactgcgcggttacttc
ccctcggcgccggagttccgcagcgacgcgcagccttgcgcgcagtgccagcggctggag
cgggagggggaagagacgggggagatgcagcgcatgatcgctacggagcagaagggggcg
ctcaccgcgctcttccaggacaaggggcggccgacgctgcagccctggcctcaggacacg
gaaacgctttatgtggtctctcagtactttctggatgagtggaggaagttcattaggcgc
ccgacgcgtgcctcgcccgtgttctcagtggggaactccacgctgctctgtcctcacagc
ggactcatgttcacccccgactctgtctcccatgaggacgcctcgctgctggcgctggtg
tggccgcccgagtgggatgtgatcagccgctcgttccaggtggacctcgccatcaccatc
acccggcggccatgtggggaagggagcagcgaagccgcgagcgcgtacatcacacagcca
ggcgtgtgtgtagagtgccaggccgctcggcgctcccagcagcagcgggaccaacaggag
tacacacaggccacagtgtacgtgcgcaaagtcgtcaaggacttcaaggtgatgaaggag
gccgtccctgagctcacgcagagcggctcggagcccgaggaggtgatggaaggaacggac
gagggcgtgcagggagagaaggaccctgacttcagccagcaggccaacgggctgaagcgg
cgccgcgtcagccccctcgagggccccggctccgcggcggcggcggcggcggcggcagag
gcggcggcggcggcggcggtgcgtcgcagcgctcgccaccgccgcgtgcgcggggagaag
gggctcgtggtgtcggcgcggcagacgctgcgcgagctcaagatacagatcatgcacgcg
ttctcagtggctccgtttgaccagaacctgtcggtggacggccggatcctgtcggacgac
tccgcctcccttggccacttgggcgtcctccccaactccgtaattctactccaggccgac
gagccgattgcagactactcgagcatcgatgacatcacgcaggtgtgcttgccggaagaa
ggctttaaaggcacagggttgctgggtcactag
DBGET
integrated database retrieval system
