Petromyzon marinus (sea lamprey): 116950682
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Entry
116950682 CDS
T09614
Name
(RefSeq) myocyte-specific enhancer factor 2A-like isoform X1
KO
K09260
MADS-box transcription enhancer factor 2A
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
116950682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116950682
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
116950682
BRITE hierarchy
Motif
Pfam:
SRF-TF
HJURP_C
TFIIA
Motif
Other DBs
NCBI-GeneID:
116950682
NCBI-ProteinID:
XP_032824527
EnsemblRapid:
ENSPMAG00000013336
LinkDB
All DBs
Position
40:4574282..4606026
Genome browser
AA seq
507 aa
AA seq
DB search
MGRKKIQIMRIVDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSSKLFQYAST
DMDKVLLKYTEYSEPHESRTNSDIVEVLSKKEHKGGESGGEGQDGDGVDGGFLLAPGTQD
KYRRINEEFDSMMRSQKLVSASGFHLPMSLSMGDPSGVSLPSFSVGGPSVVDSSPCGMLP
PPPPPLHPQMQGALLRLTGGSPAPPAQAVLPSRCWSESTQLSCQDVPRSSLRVAFNGYCS
PTQVSPSHLGSPGGGSLGGSSTGVQGLMVGGGSSAGVLGRAPPGRSPSSPGTLGADSSSP
GLGVGLSNSAGRSLAQAGNKGGLIPTALLEEQDLDLTRRLGVAQASSSPGFHCVMPSSYD
LGLTGAELATLSSFGPMSPWQRQGGPLGPTLGALADRASGIGSSYLPHTHQQQQHQQQQQ
QHHQQQQQPPQQQHQLHRVQGGTQSDHSPADSLSSSASSYDDGTSDRDDVATSSVLSLGH
ASHGASQGSLSPTSAKRLRLGEQRWIT
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtaagaagatccaaatcatgcggatagtggacgagaggaacagacaggtgacg
ttcacgaagcgcaagttcgggctgatgaagaaggcgtacgagctgagcgtgctgtgcgac
tgcgagatcgcgctgatcatcttcaacagctccagcaagctcttccagtacgcgagcacc
gacatggacaaggtgctgctcaagtacaccgagtacagcgagccgcacgagagccgcacc
aactccgacatcgtggaggtgctgagcaagaaggagcacaaggggggtgagagcggcggc
gaggggcaggacggcgacggcgtcgacggcggattcctgctcgcgccggggacccaggat
aaataccggcgcatcaacgaggagtttgacagcatgatgcgcagccagaagctcgtgtcg
gcctctggcttccacttgccgatgtctctgtcgatgggcgacccctcgggggtctcgctg
ccgtccttctccgtgggggggccctcagttgtggactcgagcccctgcgggatgctaccc
cctccgccccctcccctccacccccaaatgcaaggggcgcttctgcgtctcacggggggc
tcgccagctcccccggcccaggctgttctcccatccaggtgctggtcagagtcaacccag
cttagctgccaagacgtgccgaggtcatcattaagggtggctttcaacggctactgcagc
ccaacccaagtgtcacccagccacctgggctcaccgggagggggcagtctggggggcagc
agcacgggggtgcagggcctgatggtgggggggggctccagtgcgggggtgctgggccgc
gctccccccgggcgctccccgtcctcgccgggcacgctcggggcggacagctcgtcgccg
ggactcggcgtggggctgtccaactcggcggggcgatcgctcgctcaggccgggaacaag
ggtggcctcatcccgacggcgctgctcgaggagcaagatttggatctgactcggagactt
ggcgttgcccaggccagttcatcgcctgggttccactgtgtgatgccatcctcttatgat
ttgggattgactggtgctgagctggccaccttgtcaagctttggccccatgtcgccctgg
caacgacagggaggaccccttgggcccacgctcggagcactcgcggaccgggcttcgggc
atcggaagctcctacctgcctcacacgcatcagcagcagcagcaccagcagcagcagcaa
cagcatcatcagcagcagcagcagccgccacaacaacaacaccagctgcacagagtacag
ggaggcacgcagtcggaccactctcccgccgacagcctgagcagctccgccagctcgtac
gacgacggcacgagcgaccgggacgacgtcgccacctccagcgttctgtccctgggccac
gcctcgcacggggcctctcagggctccctctctcccacctcggccaagcgcctacggctc
ggcgaacagcgctggatcacatga
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