Petromyzon marinus (sea lamprey): 116950951
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Entry
116950951 CDS
T09614
Symbol
SEC24C
Name
(RefSeq) protein transport protein Sec24C isoform X1
KO
K14007
protein transport protein SEC24
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116950951 (SEC24C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116950951 (SEC24C)
Membrane trafficking [BR:
pmrn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
116950951 (SEC24C)
BRITE hierarchy
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
116950951
NCBI-ProteinID:
XP_032825044
EnsemblRapid:
ENSPMAG00000007550
LinkDB
All DBs
Position
41:7319976..7361191
Genome browser
AA seq
1133 aa
AA seq
DB search
MNQQGHASAPAYGPPQSGYGQYHAPYGPQYQQAPQGIHNGPPQQGYGGPPPVSASGAMKP
GMGPPPPMDPSAPPPGPQTGYNQFSQGDVQNGPSGQRPPISQAFIPPGGASPPPMQPYQQ
PAYQNAGPPLSNQQPAYQNAGPPLTHQQQPAYQNAGPPPTAHQPAYQNTGPPPNVHQPAY
QNAGPPLSTHQQQPPYQNAGPPTGPQQLTNQMGAMTLGGGATQFQGPPGSTPYGAQPPPT
SLGGQQQYGGPSLPMAGAHGLPPMPPTGPTGAIPGMQPQGGPGPGQHGYPPQQNGAYGGQ
PRAPQPGYHGSYPAQQPNFGPAPHGSGPQQPPGPRRLDPDSIPSPRLAEPLAQQKTRHRI
DPDAIPSPIQVIEDDRMQRSNDPYITSVRGQVPPLVTTDFLVKDQGNASPRFIRCTSYNL
PCTSEMAKQSQVPLAAIIKPLATLPVEETPPYIVDHGETGPVRCNRCKAYICPNMQFIEG
GRRFQCGFCNCVTEVPQHYFQHLDHTGRRVDHWDRPELSLGSYEFIATVDYCKENKPPNP
PAFIFMIDVSYNAIKSGLVSLVCEELKTLVNHLPREGQMEQSALRVGFVTYNKTLHFYNL
KASLAQPQMMVVSDVADVFVPLLDGFLVNAVESRPVIESLLEQIPEMFADTRETETVFVP
VIQAGMESLKAAECAGKLFVFHTSLPIAEAPGKLKNRDDRKLVNTDKEKTLFQAQSNIYH
SLAKDCVAAGCCVDLFLFPNQFVDVATLGLVTLQTGGSIYKYNYFQSNSDGERFLNDLRR
DVQKTIGFDAVMRVRTSTGVRATDFFGAIYMSNTTDVELAAIDCDKAVTVEIKHDDKLNE
ETGAFLQCALLYTSVSGQRRLRVHNLALNCCNQMSDMYRNCETDSMINYFAKATFRAVAH
NPTKTVRESLVNQCAQVLSCYRKNCASPSSAGQLILPECMKLLPVYLNCVLKCEVLLGGA
DIATDDRAYLQQLLLSADNTQSAAFFYPRLLPLHKLDVASEELPVSVRCSEERLQDGGLY
ILENGLSLFLWVGISVPHDLLKALFNVDTFGQIDGEMTMLPVLDNPFNKRVRDMIDSIRA
ERPRYMKLMVVKQRDKMELLFKHLLVEDKSLNGGATYVDFLCHMHKEIRQLLS
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagcaaggacacgcgtctgccccagcgtatgggcctccccagtcgggctacggg
cagtatcacgctccctatggtccccaataccagcaggccccacagggcatccacaatggg
ccgccccagcaaggctatgggggaccaccgcctgtgtcggcatctggagccatgaagcct
ggcatgggccctccaccgcccatggacccgtctgcacccccaccaggaccccagactgga
tataaccagttctcgcaaggggacgttcagaacgggccctccgggcaaagacctcccata
tcgcaggcgttcatccctcctgggggagcatcgcccccccccatgcaaccctaccagcag
ccggcatatcagaatgcagggccacccctaagtaatcagcaaccagcctatcagaacgcg
gggccacccttgacacatcagcaacagccagcctatcaaaacgcagggcctcctccaact
gcccatcagccagcctatcaaaacacaggaccccctccaaatgtccatcagccggcctat
cagaatgcaggacccccactctcgacccaccagcaacagccaccctatcagaatgcgggt
cctccgacaggacctcagcagctgaccaatcagatgggggcaatgacactgggtggagga
gcaacccagttccaagggccccctggctcaactccatatggagctcagccaccccccacc
tcacttggaggacagcagcaatatggggggccttctctgcccatggctggtgcccatggc
ttgcctcccatgccccccactgggcccacaggtgccatccctggaatgcagccccagggt
gggcctggaccaggccagcacggatacccaccccagcagaatggtgcatatggcgggcag
cctcgggctcctcagcctggctatcatggcagctaccccgctcagcagccaaacttcggt
ccagcgccacacggatcgggcccccagcagccaccaggaccacgccgcctcgaccccgac
tccatcccaagcccgcgacttgctgaaccgttggcccaacagaaaacgcggcataggata
gacccagatgctatccccagcccaatccaggtgatcgaagacgatcggatgcagcgctca
aatgacccctacatcacgtccgtgcgtggtcaggtgcctccgctcgtcaccaccgacttc
ctcgtcaaggatcagggtaatgcgagcccacggtttatccgctgcacatcgtacaatctg
ccgtgcacctctgagatggccaagcagtcccaagtacccctcgcggccatcattaaaccg
ctcgccacacttccggttgaagagaccccgccatacattgtggaccacggggagacgggg
cctgtgcgctgtaaccgctgcaaagcctacatatgtcccaacatgcagttcattgagggt
ggccgccgcttccagtgtggattctgcaactgtgtcactgaggtcccccaacactacttc
cagcatctggaccacacgggacgacgcgtcgatcactgggaccgaccagagctctctctc
ggctcctacgagttcatcgccacagtggactactgcaaggaaaacaaaccacccaaccct
ccggcattcatcttcatgatcgatgtttcatacaacgccatcaagagcggcctggtgagc
ctggtgtgcgaggagctcaagactctggtcaaccacctgcctagggagggccagatggag
cagtcggcactgcgcgtggggtttgtcacctacaacaagacgctgcacttctacaacctg
aaagcgtcgctcgcccagccgcagatgatggtggtgtccgatgtggctgacgtgttcgtt
ccgctgcttgacggcttccttgtcaacgctgtcgagtcacggcctgtcatcgagagcctt
ctggagcagatcccagagatgtttgccgatacgcgggagacagagaccgtgtttgtgccc
gtcatccaggctggcatggagtcgctcaaggcagcagagtgcgcgggaaagctgtttgtg
ttccacacttcactgccaattgccgaggcgcccggcaaactcaagaatcgcgatgaccgc
aagctcgtaaacaccgacaaggagaagacgctgttccaggcgcagagcaacatctaccac
tcgctggccaaggactgcgtggcagctggatgctgtgttgacctcttcctcttccccaac
cagtttgtggatgtggccacgctggggctggttaccctgcagaccgggggctccatttat
aagtacaactacttccagtcgaattcggacggtgaacgtttcctcaacgacctacgcagg
gacgtgcagaaaaccatcggcttcgatgcagtgatgcgtgtcagaaccagcacaggtgtg
cgagcaacggatttctttggagcgatctacatgagcaacacgacggacgtggaactcgcg
gctatcgactgcgacaaggcggtgacggtggagatcaagcatgatgataagctgaacgag
gagacgggtgccttcctacagtgcgcactgctctatacgagtgtgagtgggcagcggcgc
ctgcgtgtgcacaacctggccctcaactgctgcaaccagatgtcggacatgtaccgcaac
tgtgagaccgactccatgatcaactacttcgccaaagccacattccgtgccgtggcccat
aacccaaccaagacggtgcgtgagagcctggtgaaccagtgcgcccaggtcctgtcgtgc
tatcgcaagaactgtgccagcccctcgtccgctggccagctgattctccccgagtgcatg
aagctgctgcccgtgtacctgaactgcgtcctcaagtgtgaggtgctgctgggtggcgct
gacatcgccaccgacgaccgcgcctacctgcaacagctgctgctgagtgctgataacacc
cagtcagctgctttcttctacccccggctgttgccactgcacaagctggacgtggcgagc
gaggagctacccgtgagcgtgcgctgctccgaggagcgcctacaggatggcggcctctat
attctggagaatggcctcagcctcttcctgtgggtgggcatctccgtgccgcacgatctc
ctgaaggctctgttcaacgtcgacacgtttggccaaatcgacggcgagatgaccatgttg
ccggtactggataacccattcaacaagcgagttcgtgacatgatcgactccatcagagcc
gagagaccacgatacatgaaactgatggtcgtgaagcagcgtgacaagatggagctgctc
ttcaagcacctgctggtggaggacaagtccctgaatggtggcgccacctacgtcgacttc
ctgtgccacatgcacaaggagattcgccagctgctgagttag
DBGET
integrated database retrieval system
