Petromyzon marinus (sea lamprey): 116952962
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Entry
116952962 CDS
T09614
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like isoform X1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
116952962
NCBI-ProteinID:
XP_032828611
EnsemblRapid:
ENSPMAG00000029006
LinkDB
All DBs
Position
49:1805494..1871049
Genome browser
AA seq
2670 aa
AA seq
DB search
MAAQVKLVGGLGRDSERSPLLGRASAEHPGSAGEQQQQQPTSLSDEATGRKVRAGAEQSG
DNSGSNNSNSNSNGDQQHGVRAKDGGGSNGRGGGGGGGGGGGGDAGGVPDTSSSSSSSSS
SSSEREAGVSATEATGPSGPHHGGETPGSAGSSAEPGARGPGGLNSHGDGVYGVGGGGGY
GYDGTRSGYGPGFSGAHSPRGAGGAGAVGLNQQQDVMMMMAGGGGRAVANSSVAGYPHHH
HQHHHHQQHQQHHQHHHHHQQQQQGRLMGGQSSHSAQSSSQSAETPTLNQLLTSSNPARV
YSAMAAGQGPGPASSSSSSSTAAAAAAASAAGASSAAGGRPAATASPQPPNKQMGVMDSM
VAKRAPPYPGGNGQQPPGTFPDHAQGQAYGGPSPGYTGQGQYGPPGGGPHRYGSTTQGMP
SRPPGPGNPMSYPHQQEMVSQYNQQGMGGNPQHRQQGYYNQPPSHYNQQQHQPYPQSHYS
QQTPTQYNQQPHMPPAHYSQQPPGQYATQQQQQQQQTGHYNTQQQQQQHQGQYNQQPPAP
YNQHAQQPPGHYGQQPQGHYNAQHPAAAYGQQGSVQYGPQGYNAPGAYSQQPPGHYNQQP
SVGFPQRYQLQPETGVPDNYARAVAAGNAGPGKPGPDDPAQHSRPPSLPDLSGKIDDLTM
CGDDVAASQGDSGSSRSAPSPFSPRLPGSAGTGAGPVSAGASAAAAAAAAAAAQSPHTHT
TQSSPHPHAGPRPSSQSPRPLSAVPHSPHVTAASSRSHSPHVAVPPSPHAQQQQQQQNAA
AAAAAAAAAAAAAMGPAGPAASPSMSPSPHHGPSQSPRPPAVGASPSPHPSVGGPSPVCS
PAGSRSGPLSPAGHVGNQMTPQSTGNLSDSGSVSQSPRPQERGYPKGSGTPQGAAGMTPL
SPRPSQAGPGYPAAPAAPFPHTQHQGGPYPRTAPGQYYGGQQYPQQQQQQPPQQQQQQPP
QQQQQQPPQPQYPGYGQQYGPQGGQPTGQYGPPSAPGQFASGQQPPPAPQGAQYPPQYAG
QQGVGGGGGGGGGGPYQSQQGGQYAVQYGQQAGQYGGHAGQFGPQAVNASNCMPPGYGGF
PDGSSSSDGLSPGGEGMGQAPPAGGYGGPVSRALSRPYGGSNTPDAQMGLNGMPPGPPNS
RASVYEGGAMGPGVPPYGHGGYPQQQAMMSPSGPVMPNSLPGGYVAPPSGLVPEAKLPAK
GKGDKPASDVKSKSGSSTTTGESIMRLYELGPEPERRLWVDRYLGFMEQRGSPVALLPAV
GKNPLDLYRLYASAKAYGGFVQVNKKKKWRELSTQLAVGTSSSSASSLKKQYIQFLFAFE
CKTERGEEPPPEILNPSDNKKTPKIQPPSPAGSSSTQGPLTPQPLEGLSDMKPPTPVSTP
RPHVPPAHQNRYGGMPSGEPYPGGADPAYQRPYDGYPPRRGAEGYGGGPGDPYSQGPRPH
LQYPPSYERRPEQMMGSEGGGGGGGTGGGGMASQNSTSDPGLYSPKFPPGSQQWSDQCGT
GYMTQGPPPYPPNQPGVFSQQAYKRPAEGGYEGPPAKRQETDAVYNSHYSNNQQLSQQAP
PPPQQQQQQQQQGQYGSYEPGFPGPDHRAASGPYSQVYGRPVAPTATAQAAGTAGGPLPP
GGVAVPQGPGGPVSQEVTQGPVVAGPSQDLGALSREHGAPGQPVPANQAAGLAPSANAAP
AGQCPSPMMSQAPGGVAGAMGQPAMGVSRPSGDPTMQPGVWASRGEPPYPYQARQQGMPG
PHGPPYAVPPRSEEMMDQARGPWQQGQGQQQPQTPVQQQQQPPQQQQQQRLPQSSMSGSP
YPRPTLHHGYHQQPPYPGHGTPASGAYHRSLSPGRSPYVSGMVAPTPPGARMIHRAGHPV
PATQLGPSGCLAMPTVRRELCFPARSVEATQPTYKPRRKLTSKEVGSPEAWRVLMSLKSG
LLAESAWAVDTVNVLLYDDTSVSSFNLSQLPGLLELLVEHFRRCLIDIFGILEEYELGNS
EKKSLLDGKLFAKAQVSVRLGLNGDADKSDDEEEGGGGGAGDENTNDDSGTDRNSSAVDL
EDAPAQPDSEETTETTTTPAASSSSSSSLLPPLALAAAAASSSSSSEKAEGVKGATPAPA
NVEDAVSARSLAASTFDRLPIKVVEKAEEFVVERPDCAGTRLPDGECGRLHWQLGGGDTT
EHIQTLFESRTGRTALLHRSLKRRQRGAEPPKAPRPPGAVENGDSTDARRASAEAVPSAG
ADGFCDLGLPNGLHSPLDEKLKGAGRLLEDEPECKDDPPLCTFEDWQEALSRRCVCISNT
LRSLSFVPGNDAEMSRNPALLAILGRLILLHHRHPERRRGRMHPHDGPLTGCHAAAGTTE
GERDARKEVDADRMNRNEDDEDAKDDDEEEEEKEEGRKSSLLNGDGKEADAETGEAQESG
RGGGEAKPSVHGFGGPVASGDPNDHESSERRWWWDCLQSLRENAFVTLANIAGQLDLSTY
HESLVFPLLDGLLHWAVCPSAEARDPFPSAGPTSTLSPQRLVLECLSKLSTQDGNVDLML
ATPPFGRLRRLCGTLVTLVSERREQVCREMALALLANLAQADGLAARAIALQRGSVPTVL
GFLEDCLVALIHQQSPAAMLQHAPPPAVQHPSHDMMRRAATALLAMARAPENRPHFLLQQ
GRLLDVSMSSMLHPSIAAILGDVLYRVAQA
NT seq
8013 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccaagtgaagctggtgggcggcctcgggcgcgactcggagcgcagcccgctg
ctcggcagggcgagcgccgagcacccgggcagcgcgggcgagcagcagcagcagcagccg
acgtcgctgtcggacgaggccacgggcaggaaagtgcgggcgggcgccgagcagagcggc
gacaacagcggcagcaacaatagcaacagcaacagtaatggagaccaacaacatggagtg
cgggccaaggacggcggaggcagcaacggcagaggaggaggaggcggcggcggtggcggc
ggcggcggtgatgccggtggagttcccgacacgtcttcgtcgtcatcgtcgtcgtcgtct
tcgtcgtctgaaagggaggctggggtctctgccacggaggcaacggggcctagtgggccg
catcatggcggagagaccccgggctcggctgggagctccgccgagcccggggcgaggggg
cccggcggactgaactctcacggtgacggggtttacggggtcggtggtggcgggggttac
ggctacgacggaactcgctcgggctatgggcccggcttctcgggggctcactcgccccga
ggagcgggaggagccggagcggtggggctcaaccagcagcaggacgtaatgatgatgatg
gcgggtggcggaggaagggcagttgctaacagcagcgtggccggctatccgcaccaccac
catcagcaccatcaccaccagcagcatcagcagcaccatcagcaccaccaccaccatcag
cagcagcaacagggcaggctgatgggcggacagtcgtctcattcggcgcagtcttcgtcg
cagtcggccgagacgccaacactgaaccagctgctcacatcgtccaaccccgcccgggta
tacagcgccatggccgctgggcaaggtccggggccggcttcttcttcttcttcatcatca
acagcagcagcagcggcagcagcgtcagcagcgggagcttcgtcagcagcaggagggcga
ccagcggccacggcgagtcctcagccacccaacaaacagatgggagtgatggactccatg
gttgccaagagagctcctccatacccaggtggaaatgggcagcagccgcccggcaccttc
cctgaccacgcgcagggtcaggcgtacggtggcccaagccctggctacacggggcagggc
caatacgggcctccgggtgggggtccacaccgctacggctcgacgacccagggcatgccg
tctcggccgcctgggcctggcaaccccatgagctaccctcaccagcaggagatggtgtcc
cagtacaaccagcagggcatgggaggcaacccacagcaccggcagcagggctactacaac
cagccgccaagccactacaatcagcagcagcaccagccatacccgcagagccactacagc
cagcagacacccacccaatacaaccagcagccccacatgcctccagcccactacagtcag
cagcctccagggcagtacgccacgcagcagcagcaacagcagcagcagacggggcactac
aacacgcagcagcagcagcagcagcaccaagggcagtacaaccagcagccgccggcgccg
tacaaccagcacgcccagcagccgccaggacactatggccaacaaccccaggggcactac
aatgcgcagcatccagcggcggcgtacgggcagcagggctcggtgcagtacggcccacaa
ggctacaacgcccccggtgcctacagccagcagccgccggggcactacaaccagcagccg
tcggtgggcttcccccagagatatcagctgcagccggagaccggcgtgccagacaattac
gcacgtgccgtggcggctggaaacgcaggccccggaaagccgggccctgacgaccctgcc
cagcacagccggccgcccagcctgccggacctctccgggaagatagacgacctgacgatg
tgcggagacgacgtggcggcatcgcagggcgactctggctcgagccgctccgccccgtct
ccattctccccgcgcttgcccggctcggcgggcaccggagccggacccgtgtccgcaggg
gcatctgcagctgcggcggcggcggcggcggcggcggcccagtcgccacacacgcacacc
acccaatcgtcgccgcacccgcacgccggcccacgcccgtcctcccagtcgccacgcccg
ctgtcggccgtgccgcactcgccgcacgtcacggcggcatcgtcgcgttcccactcgccg
cacgtcgccgtgccgccctccccgcacgcccagcagcagcagcagcagcagaacgcggcg
gcggccgcggcggcggccgcggcggcggcggcggccgccatgggcccagcaggccccgcg
gcgtcgccgtccatgtccccgtctccgcaccacgggccctcgcagtcgccccgaccgccc
gccgtgggggcctctccttcgccgcacccgtccgtgggcggtccgtcgcctgtgtgctcg
cccgccggctcgcgaagcggcccgctgtcacccgcagggcacgtgggcaatcagatgacc
cctcagtccaccggtaacctgtcagattcgggctcggtcagccagtccccacggccccag
gagcgaggatacccaaagggctcggggacgccccagggagctgccgggatgactccgctt
tccccacgaccgtcccaagctggcccgggctacccggctgccccagccgccccctttccg
cacacgcagcaccagggggggccgtacccccgcacggcgccgggccagtactacgggggg
cagcagtatccccaacagcaacagcagcagccaccacagcagcagcaacagcagcctccg
cagcaacagcagcagcaaccgccacagccgcagtaccccggttatggacagcaatatggg
ccgcagggagggcagcccacggggcagtacgggccgccatcggcgcccggtcagttcgcc
agcggacagcagccccctcctgccccccagggagcgcagtacccaccgcagtacgcgggg
caacagggagttggcggcggcggaggaggaggaggaggagggccgtaccagtcgcagcag
ggagggcagtatgcggtgcagtacgggcaacaggcggggcagtatggcggccacgcagga
cagtttgggcctcaagcagtcaacgcgagtaactgtatgccgccgggctacggcggtttc
ccggacgggagctcgagcagtgatggtttgagccctggtggtgagggcatgggtcaggct
ccgccagcgggaggctacggtggccccgtgagccgcgcgctgtcccgtccctatggcgga
agcaacacccccgacgcgcagatgggcctcaacggcatgccgcccgggccgcccaacagc
agggccagcgtgtacgagggcggtgcaatgggccccggggtgccgccctacggccacggc
ggctatccccagcagcaagccatgatgagcccatccggccctgtcatgcccaacagcctg
ccaggaggctacgtggcgcccccctctgggctggtacccgaggcaaagctcccagcgaaa
ggaaagggagacaaaccggccagcgacgtcaagtccaagtcgggatcgtccaccacgacg
ggtgagagcatcatgcgcctctacgagctggggcctgagcccgagcgacgcctctgggtt
gaccgctaccttggcttcatggagcaacgtggctcgcccgtcgcgctcctgcccgccgtt
ggcaagaacccgcttgacctctaccgtctatatgcctcggccaaggcgtacggtggcttt
gtgcaggtaaacaagaagaagaaatggcgtgagctgtcgacgcagctggctgtgggcacg
tccagcagctcggccagctcgctcaagaagcagtacattcagttcctgtttgcctttgag
tgcaagacggagcgcggtgaggagccgccacctgagattctcaacccctccgacaacaag
aagacacccaagatccagccgccctctccggccggctccagctctacgcagggccccctg
accccacagccgctggagggactgagtgacatgaagccgcccaccccggtgtcgacgccg
cggccccacgtgccccctgcccaccagaaccggtacggtggcatgcccagcggggagcca
taccctgggggagccgatccagcgtatcagagaccctacgacggatatccaccccggaga
ggtgcggagggctatggaggcggtcccggagacccctacagtcagggaccaagaccacac
cttcagtatcctccaagctacgaacgacggccagagcagatgatgggttcagagggtgga
ggtggagggggtggcacaggaggaggtggcatggcctcgcagaactcgacatccgaccct
ggcctctactcccccaagtttcctcccggaagccaacaatggtcggaccagtgcggcact
ggatacatgacgcaggggccaccaccgtacccacccaatcagcccggcgtgttttcgcaa
caggcctacaagcgccctgcggagggaggctacgaaggccccccggccaagaggcaggaa
accgatgctgtttacaactcccactacagcaacaaccaacagctgtcgcagcaggctccc
cctcctcctcagcagcagcaacagcaacagcagcagggccagtacggctcgtacgagccg
ggctttcctggtccagatcacagggcggcatcgggtccgtactctcaggtgtacggccgt
ccggtggccccaacggccacagctcaggcggcgggcacggctggtggacctctccctcca
ggcggtgtggctgtcccacagggcccagggggcccggtctctcaggaggtcacccagggc
cctgtcgtagccgggcccagtcaggatctgggagcgttgagccgtgagcacggagcgccg
gggcagccagttccagcgaaccaagcggccgggctggcgccctctgccaatgccgcgcct
gccggacagtgccctagccccatgatgagccaggcgcccggcggtgtcgccggagccatg
ggccagcccgccatgggggtgtctcgcccctctggtgaccccaccatgcagccaggtgtg
tgggccagccggggcgaacccccctacccctatcaggcacggcagcaagggatgccgggc
ccgcatggacctccttatgccgttcctccgcgctccgaggaaatgatggatcaagcgcgt
ggcccctggcagcaggggcaggggcagcagcagccgcagacgccggtgcagcagcagcag
cagccgccgcagcaacagcagcagcagcgcctgccgcaaagctcgatgtccggatcgccg
tacccgcgcccaaccctgcatcacggctaccaccagcagccgccgtacccgggccacgga
actcccgcgtcgggcgcgtaccaccgctcgctgtcgccaggccgctctccgtatgtgagc
ggcatggtcgcccccacgccgcccggcgcccgcatgattcaccgcgctgggcatccggtg
ccggccacacagctgggtccgtcgggctgcttggccatgccgactgtgcggcgcgagctc
tgcttcccggcgcgatccgtcgaggccacgcaacccacgtacaagccgcgccgaaaattg
acgtccaaggaagtcggttccccggaggcgtggcgcgtgctcatgtctctcaagtcgggg
ctgctcgccgagagcgcctgggccgtcgacaccgtcaacgtgctcctctacgacgacacc
agcgtctccagcttcaacctcagccagctgcccgggctgctcgagctgctggtcgagcat
ttccgtcgctgcctcatcgacatcttcggtatcctggaggagtacgagctcggcaactct
gagaagaagtcccttctcgacgggaagctctttgccaaggcgcaggtctctgtgcggctc
ggcctcaacggcgatgctgacaagtcggatgacgaggaggagggtggcggcggtggcgca
ggtgacgagaacacaaacgacgactccggcacggaccgcaacagctcggccgtggatctg
gaggacgcgccggcgcagcccgactcggaggagaccacggagacgacaacgacacccgcg
gcgtcgtcgtcgtcgtcgtcgtctttgctgccgccgctcgcattggcggcggcggcggcg
tcgtcgtcgtcgtcgtcggaaaaggccgagggtgtcaagggtgccaccccggcgcctgca
aatgtggaggacgccgtgtcggcacgctcgctcgcggcgagcacgttcgaccgcctgccc
atcaaggtggtggagaaggcggaggagttcgtggtggagcggccggactgcgccggcacc
cgactcccggatggcgagtgcgggcggctgcactggcagctgggcggcggcgacacgacg
gagcacatccagacgctgttcgagagtcggacgggcaggacggccctgctgcaccgtagc
ctcaagcggaggcaacggggagcggagccgcccaaggccccgcgaccccccggcgcggtg
gaaaacggcgacagcacggacgcgcggagggcgtctgcggaggcggtgccgtcggctggc
gccgacggattttgcgacctcggtttgcccaacgggctgcattccccgctcgatgagaag
ctgaagggcgcaggcaggctgctggaggatgagccggagtgcaaggacgaccccccgctg
tgcacgttcgaggactggcaggaggcgctgtcgcggcgctgcgtttgcatctccaacacg
ctgcgcagcctctcgttcgtgccgggcaacgacgcggagatgtcgcggaacccggcgctg
ctcgcgattctcggccgcctgatcctcctgcaccaccgtcacccggagcggcggcgtggg
cgcatgcacccgcacgacgggccgctcaccggctgccacgccgctgccggtaccaccgag
ggagagcgtgatgcccggaaggaggtggatgcggacaggatgaatcgaaacgaggatgac
gaggatgcgaaggacgacgacgaagaggaggaggaaaaggaggagggcaggaagagctcg
ctgttgaatggcgatggaaaggaagcggatgccgagacgggagaggctcaggagtcgggg
cgcggtggcggcgaagcaaagccaagtgtgcacggttttggtggcccggttgccagtggc
gatcctaacgatcacgagtcgagcgagcgccgctggtggtgggactgcctgcagagcctg
cgggagaacgcctttgtgacgctggccaacatcgcgggccagctggacctatccacgtac
cacgagagcctcgtgttcccgctgctcgacgggctcctgcactgggctgtgtgcccgtcg
gcggaggcacgcgaccccttccccagcgcgggccccacctcgacgctgtccccgcagcgc
ctcgtgctcgagtgcctctccaagctgagcacgcaggacggtaacgtggacctcatgctg
gcgacgccgccgttcggcaggctgcgccggctctgcggcacgctggtgacgctggtgagc
gagcggcgcgagcaggtgtgccgcgagatggcgctggccctgctcgccaacctggcgcaa
gcggacgggttggcggcgcgcgccatcgcgctgcagcgcggttcggtgcccacggtgttg
ggcttcctcgaggactgcctggtagcgctgatccaccagcagagccccgccgccatgctg
cagcacgccccgccccccgccgtgcaacatcccagccacgacatgatgcggcgcgccgcc
accgcgctgctcgccatggcccgcgcgcccgagaaccggccgcacttcctcctgcagcag
ggccggcttctggacgtgtccatgtccagcatgctgcaccccagcatcgccgccatcctg
ggcgatgtgctctacagggtggcacaggcctga
DBGET
integrated database retrieval system
