Petromyzon marinus (sea lamprey): 116953572
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Entry
116953572 CDS
T09614
Symbol
SCAPER
Name
(RefSeq) S phase cyclin A-associated protein in the endoplasmic reticulum
KO
K24869
S phase cyclin A-associated protein in the endoplasmic reticulum
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pmrn03037
]
116953572 (SCAPER)
Cilium and associated proteins [BR:
pmrn03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116953572 (SCAPER)
BRITE hierarchy
Motif
Pfam:
SCAPER_N
zf-met
DUF5487
Motif
Other DBs
NCBI-GeneID:
116953572
NCBI-ProteinID:
XP_032829786
EnsemblRapid:
ENSPMAG00000019856
LinkDB
All DBs
Position
52:complement(2546263..2768798)
Genome browser
AA seq
1598 aa
AA seq
DB search
MISREMRLDGRRRRLLQASFQRSNSHDKVRRIVAEEGRTARNLIAWSVPLESRDEEGKLK
HLSAQSRRAKSANSAHQQLAGSPSKPGKRQPDGGERKAGQLLGGGGGASGAGGAGVGGGG
ISEKIPCKPRPPSKADLRARYWAYLFDNLRRAVDEIYVTCETDQSVVECKEVLMMLDNYV
RDFKSLIDWLHLQEKLEKTDVLDRPTSLAWEVRKMSPGRHVAPSPPPDRITSVTGTKRKL
TFPAAPVHNPHFAGRLSILSSVGSSWADKVRASQPGAAQAPKPGTDAKAGGPERTQQPQE
SASAADGDGWEMVQRGRPSKSRSATALAKAASGNASTNGGAGGGAASVPTTNSPPAAGGQ
PGGAAGKANASSSSRRDVGNKENRDVAPRSARPNAGCVGGGGAGGAKATAQADMKARRER
AANVCGVGGGGGGGGGSGGGVGGEDVKVSRIIAPALENQDSDVGPGIISEEKEERDDPPR
LGDPPAASQTSVPAEVPTDEHGGCGAEDGGAGGGGEGGGSEEVGGAVPESEEVAPRDGQV
VLTSTELQNSMAAVLAEEEELACRLERENEEAIANAIAEEEQLTREILDEQDLDTAGETD
TESELSASTTTMSSLSLPLNLEGPLSNMDWNDIMAEYEARESWRQTTSWGDMVEDEPPRP
PGHAIQMHEKLSSPSRKRTIAESKRKHEEKQLKAQQIREKLREENSLKLQKLMERVKEVR
KWKEELLEQKRRIMEEKLLRAEYQRELQLQAIVKKAQEEEAKVNEIAFINTLEAQNRRHD
ALCKLKEYEVRLNELRDERHRRQEEKQARDEAVQERKRALEADRLARVEELLLKRREQQA
RIEQQRQEKERAREDAARERARDREERLAALNAAQQEAMEELQKKIQLKHDESVRRHMEQ
MEQRKEKAAELSSGRHAAVDVPPKLTPYERKKQCTLCSVWILSEVYLYSHIRGKRHAQAV
REHSSITGRELSDEEVEHLSLRRYVVEAALDAPDPACPSAERVRDEEERLKAKKRAKKLR
ARMNSRAKEFEASLDGKVQVPESAYKAKLQRLVKDINKQLQSHESGPWPNNKVLALDRAL
GELMRIMEKQNPADQVAFQLSGGFESLGQILQVIASASSPNTITRIPFKSLCLAANAYCL
ACRDCADNCHHVLYSNKIVALIDLLLHHLAVLIPVGEDGGGDGASGSVNRQVFEGPSGSL
LRACGAIIDGVARSIASAAAGGSDGSRPATPRKTPAGGGGGGGGGGGGGKEARLSSSCSS
LSSCSGASTGHREGMCGRASDLVSYMVHAGVAEKLCRCLRSVQGSVDDQPRTSAFLAHAV
HLLRASCTLARLVAPRSGGQSPFDTRRPDGTGLASVLRLTEAAGVLNLLYCTLLHGAAPD
PGRASAQDGYPAHTLGVALEGVRLLNSFALLDLAAFQEVVGSEGLSLAFRHIASSLLWYC
SHHACTELLHAVIVCVGYFTVNNADNQTIVQSGRQPTVLQQLCLLPFQYFSEARLRRVLF
PTLLSACHRSPVNRSTLQTELSCTLLTSFIQETIQAASSTTRKYPDTGGEDDLDVYSRFP
QEQWEGALRFFSDGAGDAASGEPASGGGGAGVPPHCER
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgattagtcgggaaatgcgtttggacggaaggagacgtcgcttgcttcaggcgtccttc
cagcgctccaacagccacgacaaggtgcggcgcatcgtcgccgaggaggggagaacggcg
cggaacctcatcgcatggagcgtcccgctggagagccgcgacgaggagggaaaactgaag
catctgtctgcgcagtcccgccgggcgaaaagcgccaacagcgctcatcagcagctcgcg
gggagcccttcgaagcccggcaaacggcagcccgacggtggggagcgcaaagctgggcag
ctgctgggcggcggtggcggcgccagcggcgccgggggcgccggcgtcggtgggggtggc
atctccgagaagatcccgtgcaaaccgaggcctcccagcaaggcggacctgcgcgcccgc
tactgggcgtacctgttcgacaatctgcggcgagcggtggacgagatctacgtgacctgc
gagaccgaccagagcgtcgtggagtgcaaggaagtactcatgatgctggacaactacgtg
cgagacttcaagtccctcatcgactggctgcacctgcaagagaagctggagaagacggac
gtcctggacaggccgacctcgctggcgtgggaggtgcggaaaatgtcgccggggcggcac
gtggcgccgagcccgccgcccgaccgcatcacctccgtcacgggcaccaagcgcaagctc
accttcccggcggcgccggtgcacaacccgcactttgctggtagactgagcatacttagc
tccgtggggtcgagctgggcggacaaagttcgagccagtcaaccgggcgcggcgcaggcg
ccaaaacccggcacggacgctaaagcaggcgggccggagcggacccagcagccgcaggag
agcgcatctgcggcagacggcgacggctgggagatggtgcagaggggccgcccttccaag
tcccgctcggccacggcgcttgccaaggcagcttccggaaacgcgtccacaaacggcggc
gccggtggcggcgctgcgtcagtgccaacgacaaactcgccgccggcggccggcggacag
cccggcggcgccgcgggcaaggccaacgcgtcgtcatcgtcacgcagagacgtcggcaac
aaggagaaccgcgacgtggcgccgaggagcgcgaggcccaacgccggctgtgtcggcggt
ggcggcgccggaggagccaaggcgaccgcgcaagcggacatgaaggcgcggcgggagaga
gcagccaacgtatgcggtgttggcggtggtggcggcggcggcggcggtagtggcggtggt
gttggtggcgaggatgtgaaagtgtccagaatcattgcaccagcactagagaatcaggac
agtgatgtgggaccagggatcatcagtgaagagaaagaggagcgcgatgacccgccccgt
ctcggcgacccgccggccgccagccagacgtcggtgccagcggaggtgccgaccgacgag
cacggagggtgcggtgccgaagacggtggcgctggaggaggtggagaaggaggtggaagt
gaagaagttggaggagcagtgccggagagtgaagaggtggcgcccagggacggacaagtg
gtgctgacgtccactgagctgcaaaacagcatggcggccgtgctggcggaagaggaggag
ctggcgtgccggctggagcgggagaacgaggaggcgatcgccaacgccatcgccgaggag
gagcagctgacgcgcgagatcctcgacgagcaggacctggacacggccggcgagacggac
acggagagcgagctgtcggccagcacgaccaccatgtcatcgctaagccttccccttaac
ctggagggacctctgagcaacatggattggaatgacatcatggcagagtatgaggcccgc
gagtcgtggcggcagacgacgtcgtggggcgacatggtggaggacgagccgcctcggcca
ccgggccacgccatccagatgcacgagaagctgtcgtccccgtcgcgcaagcggacgatt
gccgagtcgaagcgaaagcacgaggagaagcagctgaaggcacagcagatccgggagaaa
ctgcgggaggaaaactcgctcaagctgcagaagctcatggagagggtgaaggaggtgagg
aagtggaaagaggagcttctggagcagaagcggaggatcatggaggagaagctgcttcga
gccgagtaccagcgggagctgcagctccaggccatcgtcaagaaggcgcaggaggaggag
gccaaggttaacgagatcgccttcatcaacacgctggaggctcagaaccgccggcacgac
gctctctgcaagctcaaggagtacgaagttcggctcaacgagcttcgcgacgagcggcac
cgccggcaggaggagaagcaggcgcgcgacgaggccgtgcaggagcgtaagcgggcgctg
gaagcggatcggctggcgcgcgtggaggagctgctgctcaagcggcgggagcagcaagcg
cgcatcgagcagcagcggcaggagaaggagcgggcgcgcgaggacgcggcgagggagaga
gccagggatcgcgaggagaggctggcagctctcaacgctgcacagcaggaggccatggag
gagctgcagaagaagatccagctgaagcacgacgagagcgtgcggcgccacatggagcag
atggagcagcgcaaggagaaggcggcggagctgagcagtgggcggcacgccgcggtcgac
gtcccgcccaagctgacgccctacgagcgcaagaagcagtgcacgctgtgcagcgtgtgg
attttgtcggaggtgtacctgtacagccacatccggggtaaacggcacgctcaggccgtg
cgcgagcacagcagcatcacgggccgcgagctctccgacgaggaagtggagcacctgtcg
ctgcgtaggtacgtggtggaggcagcgttggacgcccccgacccggcctgcccgtccgcc
gagagggtgcgcgacgaggaggagaggctcaaggcgaagaagagagcgaagaagttgcgg
gcgcgaatgaacagccgggccaaggaattcgaggcctctctggatggaaaggttcaagtg
ccggagtcggcctacaaagccaagctccaacgtctggtgaaggacatcaataagcagctg
cagagccacgagagcggcccgtggcccaacaacaaggtgctggcgctcgacagggccctc
ggcgagctcatgcgcattatggagaagcagaaccccgcggaccaggtggcgttccagctg
agcggcgggttcgagagcctcggccaaatcctgcaagtgatcgcgtcggccagctcgccc
aacaccatcacgcgcatccccttcaagtcgctgtgcctggcggcgaacgcctactgcctg
gcgtgccgcgactgcgccgacaactgccaccacgtcctctacagcaacaagatcgtcgcg
ctcattgatctgctcttgcatcacctcgccgtgctaatcccggtcggagaagacggcggg
ggcgacggcgccagcggcagcgtcaaccgccaggtgtttgaaggcccctccggctctctt
ctccgcgcgtgcggcgcgatcatcgacggcgtcgctcgcagcatcgcctcggcggcggcc
ggagggtcggacggcagtcggcccgcgacgccgcgcaagaccccggcaggcggcggcggc
ggcggaggaggaggaggaggaggagggaaggaggcgaggttgtcgtcgtcatgctcgtcg
ctgtcctcctgctcgggagcatcgacggggcacagggagggcatgtgcggccgcgcgtcg
gacctcgtgagctacatggtccacgctggcgtggccgagaagctctgccgctgcctgcgc
tcggtgcagggctccgtggacgaccagccgcgcacatcggccttcctggcccacgccgtg
cacctcctgcgcgcctcctgcacgctcgcacgcctcgtcgcgcccaggtctggcggtcag
agcccgtttgacacacggaggccggacggcacgggcctggcatcggtgctgcgcctcacg
gaggcggccggggtgctcaacctcctctactgcacgctgctgcacggcgcggcgcccgac
ccgggccgcgcgtcggcgcaggatggctaccccgcgcacacgctgggcgtcgcgctggag
ggggtgcgactgctcaacagcttcgccctcctcgacctcgccgccttccaggaggtggtg
ggctccgagggcctgtctctggcgttccgccacatcgccagctcgctgctgtggtactgc
tcgcaccacgcctgcaccgagctgctgcacgccgtcatcgtgtgcgtcgggtacttcacc
gtcaacaacgccgacaaccagacgatcgtgcagtcgggccggcagccgacagtgctgcag
cagctgtgcctgctgccattccagtacttcagcgaggctcgcctgcgccgggtgctcttc
cccacgctgctctccgcatgccaccgcagccccgtcaaccgcagcaccctgcagaccgag
ctcagctgcacgctgctcacatccttcattcaggagacgatccaggctgcgtcttctacc
acacgcaagtacccagacactggcggcgaggacgacctggacgtctacagccgcttcccg
caggagcagtgggagggcgcgctgcgcttcttcagcgacggcgcgggcgacgcggcgagc
ggcgagccggcaagcggtggtggcggtgccggcgtcccgccgcactgcgagcgctga
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