Petromyzon marinus (sea lamprey): 116956954
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Entry
116956954 CDS
T09614
Name
(RefSeq) integrin alpha-X-like isoform X1
KO
K06462
integrin alpha X
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
116956954
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmrn04515
]
116956954
04090 CD molecules [BR:
pmrn04090
]
116956954
Cell adhesion molecules [BR:
pmrn04515
]
Integrins
Integrin alpha subunits
116956954
CD molecules [BR:
pmrn04090
]
Proteins
116956954
BRITE hierarchy
Motif
Pfam:
VWA
VWA_2
FG-GAP
FG-GAP_3
DUF1194
Motif
Other DBs
NCBI-GeneID:
116956954
NCBI-ProteinID:
XP_032834731
LinkDB
All DBs
Position
68:complement(1016312..1114979)
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AA seq
625 aa
AA seq
DB search
MVTLGAAGQLWTALFVSVGVITARVTSYTLETTAAVSFRGNAAEEFGYAVVQHRDSAYTT
WLVVSSPLARGRSGLVHKCRLHPAISSSRHGCTNMDVQNDDVSPNGTLGLTLAKEESPSG
KVLACAPLGRLSCGKNVFLKSSCYLFDNNLNQELMIAAGYQDCPISPIDMVILIDGSGSV
SDTDFERTKDFVKAIIRTFKKKDNTQIAVVQFSRNYRLELSFLQFASSPHVEAIVSAIKQ
MRTTTQTANAINFIMNQVFTPSGGAKARAQKVLVVVTDGESNGGGLAAAIRRTQAERVVT
YAIGVGDAFKPGSPAYAELTQLASDPDSEHMFPVDDYNALNSVLRRLEEKIFSIEGASGD
LSTFEMELAATGMSAVINKGTITLGAVGAHGWMGGVVRHFSSGKSITSTNSTLDWQNMEG
PSVERDSYLGYSLIQVKLSSISLLATGAPHSHHTGTVYLFDIRSSDSKLMIYQTLPGHQL
GSYFGAVLCAVEQEQGGSGTALLLVSAPFYHTHGEEGRVYVYRRAYDGRFNLSQELGGGG
GGRGGGGLRARFGSAMASMGDVTGDGWPDVAIGAPGEGDDGAGAVYLFSGRRDGFSDGDP
QRISGSSQSGRVRMFGRSLHSLMDG
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggtgacactcggagcggctggccagttatggacggcgcttttcgtatctgtgggcgtc
atcaccgcgcgggtgacgtcatacacgctggagacgaccgcggccgtgagcttcaggggc
aatgccgctgaagaatttggctacgcagtggtacagcacagagacagtgcctacaccacg
tggctcgtggtgagctctccactggcacgtggtcgaagcggtctggtccacaagtgccga
cttcacccggccatcagcagcagcagacacggctgcactaacatggacgtccagaatgac
gatgtgagcccgaatgggacattgggtctcactctcgccaaggaagaatctccctcgggc
aaagtcctggcctgcgctccgctggggcgtctgagctgcggcaaaaacgtcttcttaaag
tcctcgtgctacctgttcgacaacaacctgaaccaggagctgatgatcgcagccgggtac
caagactgccccatatctcccatcgacatggtgattctcatcgacggctcgggcagcgtg
agtgacaccgactttgagagaaccaaggacttcgtcaaggccatcattcgtacgttcaag
aaaaaggataacacgcagattgctgttgtccagttctcccgcaactacagactggagttg
agcttcttgcagtttgcctcatcgccccacgtggaagccatcgtgtcggcgatcaagcag
atgaggaccacaactcagacagccaacgccatcaacttcatcatgaatcaagtcttcacg
ccatccggcggagcaaaggcaagagcgcagaaggtcctcgtggtcgtgacggacggagag
tcaaacggcggaggcctcgccgcggccattcggaggacgcaggccgagagggtggtgacc
tatgccatcggggttggcgatgccttcaagccgggctcccctgcctatgcggagctgaca
cagcttgcgtctgaccccgacagtgaacacatgttccccgtggacgactacaacgcactc
aactccgtgcttcggagactcgaggagaagattttcagcattgaaggagcgagcggtgac
ctgtccacgtttgagatggagctggcagctactggcatgagcgcggtcatcaataagggc
accatcacgttgggagccgtgggggcccacggctggatggggggcgttgtccggcatttc
agcagcgggaaatccatcacgagcaccaactccaccctggactggcagaacatggaaggg
ccgagcgtggagagagactcctacctgggctactcgctcatccaggtcaagctgagctcg
atcagcttgctcgcgactggagcccctcacagccaccacacgggcaccgtctatctcttc
gacatccgctcctccgactccaagctcatgatctaccagaccctgccaggacatcagctg
ggctcgtactttggagccgtcctctgcgcagtggagcaggagcagggaggatcaggcacg
gcccttctgctggtatcggcgcccttctaccacacgcacggcgaggagggacgcgtctac
gtgtacaggcgcgcttacgacggccgcttcaacctctcccaggagctcggcggcggcggc
ggcggccggggcggcggcggcctccgggcgcgcttcggctcggccatggcctccatgggc
gacgtgacgggggacgggtggccggacgtggccatcggggccccgggggagggagacgac
ggggccggagccgtttacctcttcagtggccggagggacggcttctcggacggagacccg
cagaggatctctggaagctctcagagtggccgagtgagaatgtttgggaggtcgctccac
tcgctgatggatgggtga
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