Petromyzon marinus (sea lamprey): 116957129
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Entry
116957129 CDS
T09614
Symbol
U2SURP
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein
KO
K12842
U2-associated protein SR140
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116957129 (U2SURP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmrn03041
]
116957129 (U2SURP)
Spliceosome [BR:
pmrn03041
]
Complex A
U2 snRNP components
U2 related factors
116957129 (U2SURP)
Complex B
116957129 (U2SURP)
BRITE hierarchy
Motif
Pfam:
Surp
RRM_1
CID
cwf21
CTK3
RRM_7
Motif
Other DBs
NCBI-GeneID:
116957129
NCBI-ProteinID:
XP_032834983
EnsemblRapid:
ENSPMAG00000041973
LinkDB
All DBs
Position
70:3044178..3106821
Genome browser
AA seq
977 aa
AA seq
DB search
MKNASDKGSSAGAGGGGKMNPAKKAVRQKEEEVKAAEVYEEFLASFEGSSSGGIKTFVRG
GIVNAKDEGEEHKKGRLYRPTSRLMDTKPSQAESPAAPPPAFDARKPLVKKGEKEKKKSN
LELFKEELKMIQEEREGRHKLKKVMQDGSYRPSRFEPLSSELEQQLAKRSSVLDEYTSGS
YDTGDPSTTNLYLGNINPKMNEEMLCQEFGRFGPLASVKIMWPRKDEERARDRHCGFVAY
MNRKDAERALKLLNSKEIMGYEMRLGWGKAIPLPPYPLYIPPAMLELTMPPPPSGLPFNA
QPRERLRNPHAPLPPPPANNEELEKTLSQAVVKVVIPTERPLLCLIHRMIEFVVREGPLF
EAIIMSREINNPMYRFLFDNQSPAHVYYRWRLFSILQGDSATRWRTAEFRMFEGGSVWRP
PPLNPYLQGMPEELEPLLLQGLAEGSESEQPLKKGQLKEDERDKLENVLRGLTPRKSEIG
DAMAFCLQHAEAAEEVVECIAESLSILQTPLPKKIARLYVVSDILHNSCAKVANASYYRK
YFEAKLPQIFADIHEVYKSIQGRLQAEQFKQKVMSCFRAWEDWAVYPDSFLIKLQNVFLG
LVRINDDGKEVSVVPGAGAGAEEVDGAPLDDDDVDGAPLEEEEEGEEGEGGGGGGEGPPP
RAGGAGPLDGAPLDDLDGLPMQAGDDIDGLPLDDALPKKAMLPIASSKWERVDDLDTDNT
RRSPPPSGKRDDDSDDASGGTVGAAGKLPLGFTATAVASSSSSAGSPSGGPAGASGAGGD
AGKPGQGGAVGSGSSVSDEAAQKSLLKSLEVSEEKRAKLREIELKVMKFQDELECGKRHK
KAGQSIREQVEHYRSKLLAREKEKKERDKKDRDKEEKRKGRREGGRGSSSPTPQQQQQQQ
QAAQQQQQQQQQAPPPPATPSASSSSSASRRERKRSSSSRSGSEERYPSPSPSPSPCPSR
QQQQQQQQRRQPRPQRD
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacgcgtccgacaagggaagtagcgccggtgctggcgggggtgggaaaatgaac
cctgccaagaaggccgtgaggcagaaggaggaggaggtgaaggccgccgaggtgtacgag
gagttcctcgcctccttcgaggggagctcgtccggcggcatcaagacgttcgtgcggggc
ggcatcgtcaacgccaaggatgagggcgaggagcacaagaaagggcgactctaccgcccc
acgtcccggctcatggacaccaaacccagccaggccgagtcgccagcggcgccgcctccg
gccttcgacgcacgcaagccccttgtcaagaaaggagagaaggagaaaaagaaaagtaac
ctggagctctttaaagaggagctcaagatgatacaggaggaacgggagggccgccacaag
ctgaagaaggtgatgcaggacggctcctaccggcccagccgcttcgagccgctctcctcc
gagctcgagcaacagctcgccaagcgctcctcagtgctagatgagtacaccagcgggtcg
tacgacacgggggatcccagcaccaccaacctttacctcggcaacatcaaccccaagatg
aacgaggagatgctgtgccaggagtttggccggttcgggccgctggccagcgtcaagatc
atgtggcctcgcaaggatgaggagcgtgcccgggaccggcactgcggcttcgtggcctac
atgaaccgaaaagatgcagagcgtgccctcaaactgctcaacagcaaggagatcatgggc
tacgagatgaggctgggctggggcaaggcgatccccctgccgccatacccactctacatc
ccgccggccatgctggagctcaccatgccgccaccgccctcggggctgcccttcaacgcg
cagccgcgggagaggctccgcaacccccacgcgccgctgccgccgccgcccgccaacaac
gaggagctggagaagactctgtcccaagccgtagtaaaagtggttatacccaccgaaagg
cccctgctgtgcctcatccaccgcatgatcgagtttgtggtgcgcgagggaccgctcttc
gaagccatcatcatgagccgggagataaacaaccccatgtacagatttctctttgacaac
caaagtccagcccacgtctattaccgctggaggctgttttccatcctgcagggcgactcg
gcgacgcgctggcgcacggccgagttccggatgttcgagggcggctcggtgtggcgcccg
ccgcccctcaacccgtacctgcaggggatgcccgaggagctggagccgctgctgctgcag
ggcctggcggagggcagcgagagcgagcagccgctcaagaaggggcagctcaaggaggac
gagcgggacaagctggagaacgtgctgagggggctgacgccgcgcaagtcggagatcggc
gacgccatggccttctgcctgcagcacgctgaggcggccgaggaggtggtggagtgcatc
gccgagtcgctctccatcctgcagacgccgctgccgaagaagatcgcccgtctctatgtc
gtgtcggacatcctgcacaactcgtgcgcgaaggtcgccaacgcctcctactacaggaaa
tacttcgaggccaagctgccgcagatcttcgccgacatccacgaggtctacaagtccatc
caagggcgcctgcaggccgagcaattcaagcaaaaggtgatgtcgtgtttccgcgcgtgg
gaggactgggccgtgtacccggactcgttcctcatcaagctccagaacgtcttcctggga
ctcgtgcggatcaacgacgacggcaaggaagtctccgtggtaccgggggcgggggcgggg
gcggaggaggtggacggggcgcccctggacgacgacgacgtggacggggcgcccctggag
gaggaggaggagggggaggagggggaggggggtggaggaggaggggaggggccgcccccc
cgggcggggggcgccgggccgctggacggggcccccctggacgacctcgacgggctgccc
atgcaggccggggatgacatcgatgggctgcccttggacgatgctctccccaagaaggcg
atgctgcccatcgcgtcgtccaagtgggagcgcgtggacgacctggacacggacaacacc
cgccgctccccccctccgtcgggcaagagggacgacgactcggacgatgccagcggcggc
acggttggcgctgcgggcaagttgccgctgggcttcaccgccacggccgtcgcctcctcc
tcctcctccgccggcagtcccagcggaggtcccgcgggtgcctctggcgccggcggtgac
gcgggcaagccggggcagggcggcgcagtcggctccggttcgtcggtgagcgatgaggcc
gctcaaaagtccctgctcaagtccctggaggtgtcggaggagaagagggccaagctgagg
gagattgagctgaaggtgatgaagtttcaggatgagctggagtgcggcaagcgccacaag
aaggcgggccagagcatccgcgagcaggtggagcactatcggagcaagctgctcgcaagg
gagaaggagaagaaggagcgtgacaagaaggatcgcgacaaggaggagaagcggaagggg
cgccgggagggtggtcgtggctcctcgtcgcccacgccgcagcagcagcagcagcagcag
caggcggcgcagcagcagcagcagcagcagcagcaggcgccacctccgcctgcaacgccg
tcggcgtcgtcgtcgtcgtcggcgtcacgtcgcgagcggaagcgcagcagcagcagccgc
tcgggctctgaggagcgctaccccagccccagccccagccccagcccctgcccctcgcgc
cagcagcagcagcagcagcagcagcggcgccagccgcggccgcagcgcgac
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