Pasteurella multocida subsp. multocida Pm70: PM1921
Help
Entry
PM1921 CDS
T00046
Symbol
rhlB
Name
(GenBank) RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pmu
Pasteurella multocida subsp. multocida Pm70
Pathway
pmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PM1921 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmu03019
]
PM1921 (rhlB)
Enzymes [BR:
pmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PM1921 (rhlB)
Messenger RNA biogenesis [BR:
pmu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PM1921 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
AAK04005
UniProt:
Q9CJS1
LinkDB
All DBs
Position
2160520..2161791
Genome browser
AA seq
423 aa
AA seq
DB search
MQNNYLSQLRFSDLPLHHQVLAALQEKGFDYCTPIQALSLPMSLAGKDVAGQAQTGTGKT
MAFLTATFHHLLTQQGDKGGRQPRALILAPTRELAVQINNDAALLTKATGLKTGLAYGGD
GYEKQLKAIEQGVDILIGTTGRVIDYVKQGIVRLDKIQVVVLDEADRMFDLGFIKDIRYL
LRKCPAPQHRLTMLFSATLSYKVRELAFEDMNDPEYVEIEPLQKTGHRIKEELFYPSNQD
KMALLLTLLEEEWPERCIIFANTKHRCEDIWGYLAADGHRVGLLTGDVAQKKRLSLLKQF
TEGHLDILVATDVAARGLHISDVSHVFNYDLPDDREDYVHRIGRTGRAGESGVSISFACE
EYAMNLPAIEEYISHSIPVSQYDVAALLTLPKPYRIKRGNNNSKNSANSNRTFQKKRSLK
RNF
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataattatttatcgcaacttcgtttttctgatttacccttgcaccatcaggtg
cttgctgcgttacaagaaaaaggctttgattactgtaccccgattcaagcactttctttg
ccaatgagtttggcgggaaaagatgtggctggacaagcacaaaccggtacaggcaaaacg
atggcatttttaacagcgacctttcatcatttattaactcaacaaggcgataaaggggga
cgtcagccgcgcgccttgattcttgcaccaacgcgtgagcttgctgttcaaatcaataat
gatgcagcgttacttacgaaagccacaggattaaaaacaggacttgcctatggcggtgat
ggctatgagaaacaactcaaagccattgagcaaggtgttgatattttaattggtaccact
ggacgtgtgattgactatgtgaaacaaggcattgtgcgtttagacaaaattcaagtggtc
gtgttagatgaagcggatcggatgtttgatcttggctttattaaagatattcgttattta
ttgcgtaaatgcccagcgccacaacaccgtttgaccatgctattttctgcgaccttatcc
tataaagtgcgcgaattggcgtttgaggatatgaatgatccggaatatgtagaaattgaa
cccttacaaaaaacgggacatcgtattaaagaagaacttttttatccttcaaaccaagat
aagatggcgttgttgctcacgttgttagaagaagaatggccagaacgttgcattattttt
gctaacacgaaacatcgttgtgaagacatctggggctatctggcggcagatggtcaccgt
gtggggctactcactggcgatgtcgcacagaaaaaacggctttcactgttgaagcaattt
accgaaggtcatttggatattctcgtggcgaccgatgtggctgcacgtggtttacatatc
tctgatgtgtcgcatgtgtttaattatgatttgccagatgatcgcgaggactatgtacac
cgtatcggtcgtactgggcgtgcgggggagagtggagtgtcgattagttttgcgtgtgaa
gaatatgcgatgaatttgcccgcaattgaagaatatatctcacatagtattcctgtcagt
caatatgatgtggcggcgttattgaccttgccaaaaccgtatcggatcaagcgtggcaat
aacaacagcaaaaatagtgcaaattcaaaccgcacttttcagaaaaagcgcagtctaaaa
cgaaacttttaa
DBGET
integrated database retrieval system
