Podarcis muralis (common wall lizard): 114587381
Help
Entry
114587381 CDS
T06059
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114587381 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Big_9
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
114587381
NCBI-ProteinID:
XP_028567349
LinkDB
All DBs
Position
17:18500028..18580381
Genome browser
AA seq
2173 aa
AA seq
DB search
MKALGNSWLLLLFALNLRSINSSFVNVNRGAKVMKGQSIFLLQEDLQFSIPREKDACKVE
VVMNEPMTQRVGKLTPQVFDCHFLPNEVKYTHNGCPILNEDLVMLRLYRFTETETFTEMV
PFLVKLLEPDCNIIKMSSSALQVPGFHGLSNVINKNVITLDYNRKINLDCTISLMSVETF
LPAHGQLVRGSAEEEPPRGDQPHSFPPTTGRRRGEKCPTGSCVSGLKTIQNIKVSCEDFL
LMGLRYQHLDPPSPNIDYVPIRLDLTDSRSKTIYKSEHAWLPVHIGGAFPNQPPQAAFMA
MQILEADQFILSLLSTTILDAEDSETAKSLLVFNITKPPQEGYITHLQDHTRPISSFTWN
SLNDMLIAYQPPNSSHTERRNYEVEFEVHDLYFERSSPITIHISVRTAHTNAPRVSWNTG
LDLLEGQSRPITWEQFQIVDNDDINGVRIVTVDGLQHGQLTLRGGKGFMFTVSDLKDGLV
RYHHDDSDSTKDYIVFRIFDNRHSSRHKFPINILPKDDSPPFLISNVEIEVHEGQTILIQ
GSMLQASDMDSSDDYILFNITKPSQAGEIMKIPGPDLIGYPVTKFLQKDLFNGIIYYHHL
GGEIFEDSIEFVLCDCNDPPNLSETQEVRVHIIPSDDQLPKEISGTSRHLTVKETEIAHL
TKKHLSYIDREAQEREIIYTITSPPFFSSVHHHMDAGKLFMVDSIPKLIKDPATPSLISF
TQHAINHMKVAYMPPLQDIGPESQYIHFTFSVSNRHGKTLQGICFNITIVPVDNQAPEVF
TNNLKVEEGGSCTITEGHILISDVDTKQENIRIHLLRPPLHGAVELAGIPLNQGDWLTCE
DLHLSKVRYLHDGSEVLLDHILLAATDGINSFEFNLQVQVNPVNDEPPVMNADLIPSIEC
PEGQAVAITSENLYATDEDSEDMQLMFMLARNPKYGVVKKDGIVVDRFPQVDVVSGAVEY
EHTSGEIGLTPLFDILTFVVSDDEIGPTNECCYDESPFPPVPLHKSFPVYDINITIFPID
NQPPSIVTGAMFVVDEGTSAAITINHLSAADPDTKADDLQLVLASPPQFGYIENILPSPG
FEKSNVGISIASFQLKNIKGLHINYVQSRHRRIEPTADQFMVYATDGKRRSMETPFYVLI
NPMNDEVPEFEARNITVQEGQMKELDPSVISAVDLDVPQDPLIFTVLRQPQHGFLVNGNH
GNDIIRYKHAIDSHQRHELPMHGFSMELLKNGMRLMYMHDDSDSLADGFSIQLSDGKHKV
SKTISVEVIPVNDEKPVLSKKGKIEVTMGEAQIISSAVLSAEDKDTPREQIYYLFESVPE
NGHLQLKVGHDWETLQNGMKCTQNDIDMNSVRYIHTGTIGSKEQDSFVFHLWDGDNRSPE
VVFPITIKDLEKGNIAVFTKPLTVMKGDRGYLMTDVLLAVDGTEKPEEILYVITSPPQYG
QLEYVTYPGVAITSFSQMDVAGQAVCYVHHSKAASPRDTFRFIVSNGLRTKHGEFEIILE
TVDQALPTVAKNKGLTLLGGGIALISPDILQLSDPDTDPQNLSFLLAQLPQYGQLFNRMS
GLWQQSFSQQDVDNLNIAYRHGGGDSRIDRFTFVATDGVNEGFIVNNKVQLEPLAFSIQV
DSPAKAAPEIVHLHAASDVELLKNGNFGIYITSRALKASDCDGDDEQIIFKILRGPRYGY
LQNVTTGGFIQHEFSQKDLKSKTILYVIDRYWEGNSEDLEIQVTDPEGNSAMPQILELKW
SKIEMEQDVYEVCENVEVLPLRITRSGYITDSAFVAVKINEVTASSGKDFTAAPSKLIQF
DPGMSTKMWNIAITYDGLEEDDEVFEVVLISPVNAVLGSRTKAAVKILDSKGGQCSSFHS
SSQNIHNLWMKGTLLPGPSSSSRHGTVHLEGIPLPASKEMVVQRRDKLPEFNSVNLARSR
LRALGNGKIVRPSFTFRNGTGVFFKYHGMAVLRVEDDNPLPKKNKMAATSVINQRVPRKN
MAPLKKMEVPQADSSIPVQSLSFPNRCTPDLKGLLHFEGITQKMFQCDGHSWTLWSNADQ
GINVITCPPDWTHHDGSCYILITDPKVTWTVAARDCREQYHGSLVSVASKTHMQWLWDFS
GRRPFWIGFNDRRNPGQFRWNNGDRVAFTNWGKEPSRLSKKGKNCVLVQQRGKWQRKNCK
KGKGHNYICSRKL
NT seq
6522 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctttggggaacagctggctccttttgctctttgcacttaatctgagaagcatc
aactcctcctttgtcaacgtcaaccgtggggcgaaagtgatgaagggccagtccatcttc
ctgttgcaagaggacctgcagttttccattccccgagagaaggacgcttgcaaagtggaa
gttgtgatgaacgagccgatgacgcagagggttgggaaactaaccccacaggtgttcgat
tgccattttcttcccaatgaagtcaagtatactcacaacggatgcccaattctcaatgaa
gacttagtcatgctgaggttatacagatttacggaaaccgagacatttaccgaaatggtt
cccttccttgtaaagttacttgaacctgattgtaatattatcaagatgagctcgagtgcc
ctacaggtccctggctttcatggcctgtccaatgtaattaacaagaacgtaattacttta
gactacaacaggaaaataaacttggattgtaccatcagcctgatgtccgtagaaactttt
ctaccagcccatgggcaacttgtcagaggatcagcagaagaagaaccacctcgtggtgat
cagcctcatagtttccctcccacaaccggacgtaggagaggtgaaaagtgtccaactggg
agctgtgtttcaggcctgaagaccatacagaacattaaagtgagctgtgaagattttctc
ctgatgggcctaagataccagcatttggaccctccttcgcccaacattgattacgttccc
atcaggctggatctcacagatagcagaagcaagaccatctacaagtctgagcatgcttgg
cttcccgttcacattggaggtgcgtttcctaaccagccgccccaagctgccttcatggct
atgcaaatcctagaagcagaccagttcattctgagcctgttgtcaacaaccatactggat
gccgaagacagtgaaacagccaaatccctgctcgttttcaacatcaccaaaccaccccag
gaaggctacattactcatctgcaagaccacacaaggcccatctcatccttcacctggaac
agcctcaatgatatgcttattgcttatcagccaccaaacagcagccacacagagaggaga
aattatgaggtggagtttgaagttcatgatttgtactttgaaagaagttcaccaattact
atccatatctctgttagaacggcacacacaaatgcacctcgggtctcatggaatactggt
cttgatctcctggaaggacagtctcgccctataacttgggagcagtttcagattgtagac
aatgacgacatcaatggtgttcgcatagtcactgttgatggtctacagcatggacagctc
actctaagagggggaaagggattcatgttcacggtctcagaccttaaggatggtcttgtc
cgttaccatcacgatgacagtgattccacaaaggactatattgtcttcaggatctttgat
aaccgacacagcagtcgccacaaatttccaatcaacattctgcctaaagatgacagccct
ccatttctcatcagtaatgttgaaatagaagtgcatgaaggacagacaattctgatccaa
ggctcaatgcttcaagcctccgacatggactctagcgatgactacatactcttcaatata
accaaaccatcacaggcaggagaaatcatgaagatacctggaccagacctaattggttat
cctgtcactaaatttcttcagaaagatctattcaatgggatcatttactaccatcactta
ggaggagaaatatttgaagattccattgaatttgttctgtgtgactgtaatgatcctccc
aatctttcagaaactcaggaagtcagagtgcacataattccttcagatgatcaacttccc
aaagaaatttcagggacgagccgccatctaactgtcaaggaaactgagatcgcccatcta
acaaagaaacatctcagttatatcgacagagaagcgcaggaaagggagatcatctatact
ataacttctcccccattcttctcttctgtacatcaccacatggacgctgggaaactgttt
atggttgacagcattcctaaactgattaaggatcctgctactccatcactgatatcattc
acacagcatgccataaaccacatgaaagttgcttacatgccgccgttgcaagatatcggc
cctgagtctcagtatatccatttcacattttcagtcagcaatcgacatggcaagactttg
caggggatctgttttaacattaccattgtcccagtagacaatcaagctccagaggtgttc
acaaacaacttgaaagtagaagaaggggggtcatgtaccattacagagggccacattttg
atttcagatgtggacaccaaacaggagaacatccgcatccatctgctaaggccacctctt
cacggagctgttgagctggctgggattcctctgaatcagggggactggctcacctgtgaa
gacctgcacctgtccaaagtcaggtatcttcacgacggttctgaggttctgctggaccat
atcctgcttgcagctacagatggtatcaattccttcgagttcaatctgcaagttcaggtg
aatccagtaaatgatgaacctcctgtcatgaatgctgacctcattccctccatcgaatgc
ccagagggtcaggcagtggccatcacctcagagaacctatatgctactgatgaagacagt
gaagacatgcagctgatgttcatgctcgctcgaaatcctaaatatggggttgtgaagaaa
gatgggattgtggtggatcgctttccacaagtagatgttgtttctggagcagtggaatac
gaacatacaagtggagagattggcttgacccctttatttgatatccttacctttgttgtc
tcagatgatgaaattggaccaacaaatgagtgttgttatgatgaatctccttttcctcct
gttccgcttcataaatcttttccagtatatgatattaacatcacaatatttcctatagac
aaccaaccaccatccattgttactggtgccatgtttgttgtggacgagggcacctcggcc
gccattacaattaaccacttgtctgccgctgatcctgacacgaaagcagatgacttgcag
cttgttttagcttctcctccccaatttgggtacatagagaatatattgccttcccctggc
tttgagaaaagcaatgtgggaataagcatagcctcatttcagctgaaaaacataaagggt
ctgcacataaactatgtccagagcaggcacaggagaatagaaccaaccgcagaccagttt
atggtttatgccactgacgggaagcgtcgttcgatggagacaccgttttatgtattgatc
aacccaatgaatgatgaagtgccagaatttgaagcaaggaatattacagtgcaggagggc
cagatgaaggaactggatccatctgtaatcagtgctgttgatctggatgtacctcaagat
cccctgatctttaccgtcctccggcaaccccagcacggcttccttgttaatgggaatcat
ggcaatgacatcatccgctataaacatgcgatcgacagtcaccagcgccacgaacttcct
atgcatgggttttccatggagcttttgaaaaacggaatgaggctgatgtatatgcatgat
gactccgacagcctagcggatggcttttcaatccagctatcagatgggaaacataaagtg
tcaaaaaccatttcggtagaggtcattccagttaatgacgagaaaccagtgctgagcaag
aagggtaagatagaggtgactatgggcgaagcccaaattatttctagtgctgttctgtca
gctgaagataaagacaccccaagggaacaaatttattatttatttgagagtgtcccagaa
aatggacatcttcagctcaaggtaggccatgactgggagacactccaaaatgggatgaag
tgcacccagaatgacatagacatgaactctgtgagatacatacacaccggaacaattggc
tcaaaggagcaggacagttttgtgtttcatctgtgggatggagacaatagatcaccagag
gtggttttccctattaccatcaaggacttggaaaaaggaaacattgcagttttcacaaag
cccctcactgtgatgaagggtgacagaggctacttgatgactgacgtcctccttgcagtc
gatggcactgagaagccagaggagatcctttatgtgataacctccccacctcagtatgga
caacttgagtatgtcacctatcctggagttgccattacaagtttcagccaaatggatgtg
gcaggccaggctgtctgctatgtccaccatagcaaggcagcttctccaagggatacgttc
agattcatcgtcagcaatggactaaggacaaaacacggagagtttgagatcatcctggag
acagtggaccaagccttacccacagtggccaagaacaaaggcttgaccttactcggaggt
ggcattgcgctcatttctccagacattctccagctctcggacccagacacagatccgcaa
aacctctcctttctcctagcacagctcccacagtacggccagctcttcaacagaatgtct
ggcctatggcagcaaagcttcagccaacaagatgtggacaatctgaacattgcttataga
catggaggaggggattctcggattgacagatttacatttgtggcaacagatggagtgaat
gaaggcttcatagtaaataacaaggtgcaactagagcccttggcgttcagcatccaggtg
gacagcccagccaaagcagcaccagaaattgtccaccttcatgctgcttcagatgtagaa
cttctgaaaaatggcaactttggtatttacattacttcccgggccctgaaggcatcagat
tgtgatggagatgatgaacaaataattttcaagattttgcgaggacctcggtacggctac
ttgcaaaatgtaacaacaggtggatttattcagcatgaattcagtcagaaggatttaaag
agcaaaaccatactttatgtcattgaccgttactgggaggggaattcagaagacctggag
attcaagttaccgatcctgaaggaaactctgcaatgcctcagatactggaactgaaatgg
tcaaaaattgaaatggaacaggatgtttatgaagtttgcgaaaatgtggaggtgctgcct
ttgaggatcacccgatcagggtacatcacagattctgcctttgttgcagtgaagatcaat
gaagtaactgcttcatcaggaaaggattttactgcggctccttctaaacttattcagttt
gatccagggatgtcaaccaagatgtggaatatagcaattacctatgacggattagaggaa
gacgatgaggtctttgaagtggttctcatctctcctgtgaatgcagttcttggcagtagg
acaaaagctgcagtgaaaattttggactcaaaaggaggtcagtgcagctcattccactcc
tcaagccaaaacattcacaacttatggatgaaaggaacattgcttccaggcccctcttca
tcttccaggcatggcactgttcatttggaagggatcccattgcccgcttccaaagagatg
gtagtgcagagaagggacaaattaccagaattcaactcggtgaatcttgcaaggagccgg
ctaagagcccttggaaatggcaaaatagttcgtccttctttcacttttagaaatggcact
ggcgtcttttttaaataccatggaatggcagtgctcagagtggaggatgacaacccattg
cctaaaaaaaacaagatggcagccacgtcagtaattaaccaaagagtgccgaggaaaaat
atggctcccctcaagaaaatggaagttccgcaagcagactctagcattccggtccagagc
ctttcctttccaaacagatgcacgccagatttgaagggtctcttgcattttgaaggaatc
actcagaagatgtttcagtgtgatggtcattcctggactctgtggagtaatgcagaccag
ggtattaatgtgattacctgccctcctgattggacccatcatgatggaagctgctacatc
ctgatcaccgatccaaaagtcacgtggaccgtagctgcccgggattgcagggaacagtac
catggcagcttagtaagtgtggcttctaaaacacacatgcagtggctgtgggacttcagt
ggaagaagacccttctggataggcttcaacgacagaagaaatccaggccaattcagatgg
aataatggagaccgtgttgctttcacaaactgggggaaagagccctcacgtctttcaaag
aaaggaaagaactgtgttttagtacagcagcgggggaaatggcaaagaaagaactgcaag
aagggcaaaggacacaattatatatgctctaggaaactgtaa
DBGET
integrated database retrieval system
