Podarcis muralis (common wall lizard): 114591278
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Entry
114591278 CDS
T06059
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114591278 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmua03041
]
114591278 (DDX46)
Enzymes [BR:
pmua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114591278 (DDX46)
Spliceosome [BR:
pmua03041
]
Complex A
U2 snRNP components
U2 related factors
114591278 (DDX46)
Complex B
114591278 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
114591278
NCBI-ProteinID:
XP_028573899
LinkDB
All DBs
Position
2:57724888..57762532
Genome browser
AA seq
1061 aa
AA seq
DB search
MGRESRSTKQQVSKQKQHYRKRSSSRGRSGSRSKSRSPSDKRAKRGDDRRSRSRDRERRR
ERSRSRDKRRSRSRDRKRVSITQNLLVRRRSRSRERERSRERRRSRSRERRRSRSRSRGR
RSRSSSPGKNKKVENRSRSKEKVEGVEVNKEKKKEKEDKEEEKGQDVNNFDQNKLEEEMR
KRKERVEKWREEQRKKAMENIGELKKEIEEMKQGKKWSLEDDDDDDEETAEGEKEGNEIE
DEELDPLDAYMEEVKEEVKKFNMRSVKGGGGGGSEKKSGPTVTKVVTVVKTKKASPETEK
KKGELMVNDQDAMEYSSEEEEVDLQTALTGYQTKHRKLLEPVDHGKIEYEPYRKNFYVEV
PELAKMTQEEVNAYRLEMEGIIVKGKGCPKPIKTWVQCGISMKILNSMKKHGYEKPTPIQ
AQAIPAIMGGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRPLEEGEGPIAVIMTPTRELAL
QITKECKKFSKTLGVRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTN
LRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPI
EVQVGGRSVVCSDVEQKVIVIEEENKFLKLLELLGHYQEQGAVIIFVDKQEHADGLLKDL
MRASYPCLSLHGGIDQYDRDSIINDFKSGVCKLLVATSVAARGLDVKHLMLVVNYSCPNH
YEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSSNPVPPELEKLWTDFKDQ
QKAEGKTIKKSSGFSGKGFKFDETEEALANERKKLQKAALGLQDSDDEDTAVSIDEQIES
MFNSKKRVKDMASSGGTSNVPAPTAGNAEKLEIAKRLALRINAQKNLGAEAQVLVSFQFK
DVMQQATNAILRGGTIQAPTVSAKTIAEQLAEKINAKLNYVPIEKQEEEKQEGGQNESFK
RYEEELEINDFPQTARWKVTSKEALHRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAI
ESANELAVQKAKAEITRLIKEELIRLQNSYQPTNKGRYKVL
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcgagtccagatcaacaaagcaacaggtgtccaaacaaaaacagcattatcgg
aagcgctcctcatcacgagggcgttctggtagccgttctaagagtcgctctccatctgac
aaaagagcaaaacgtggagatgatagacgttctagaagcagggacagagaacgtaggcgt
gaaagatcacggagcagggacaagaggagatctcggtcacgtgatcgaaagcgtgtgagt
attacccaaaatctgcttgtgcgtaggcgttcacgaagcagagagcgggaacggagcaga
gagaggagacgatcacgcagtcgagaaagaagaagatccagaagccgaagtagagggcga
cggtcccgatcttctagccctggcaagaacaagaaagtagaaaacagatcacgatctaaa
gaaaaggtagaaggtgtggaagttaacaaagaaaagaaaaaagagaaagaggacaaagaa
gaagaaaagggtcaagatgtaaataatttcgatcagaacaaactagaagaggaaatgagg
aagcgaaaagaaagagtagagaaatggagagaagaacagcgcaaaaaagctatggaaaat
ataggagaactaaagaaagaaattgaagaaatgaagcaggggaaaaaatggagcttagaa
gatgatgatgatgatgatgaagaaactgcagaaggggaaaaggaaggtaatgagattgaa
gatgaagaacttgatccattagatgcatatatggaagaagtgaaagaagaggttaagaag
ttcaacatgagaagtgtaaaaggtggaggtggaggtggaagtgaaaagaaatctgggcca
acagttactaaagtagtaacagtggtgaaaaccaaaaaagcatctccagaaacagaaaag
aagaaaggagaacttatggtgaatgaccaagatgcaatggagtattcttctgaagaggag
gaagtagatctccagacagcactgacagggtaccagaccaaacataggaaattgctggaa
ccagtggatcatgggaagattgaatatgagccctaccggaaaaacttctatgttgaagtt
ccagaactagctaagatgactcaggaagaggtgaatgcatataggctggaaatggaagga
attatagtcaagggtaaaggatgtcctaagccaattaaaacctgggtacagtgtggtatt
tctatgaaaatcctgaattccatgaaaaagcatggctatgagaagcccacccctatccaa
gcccaggctatacctgcaattatgggtggacgtgatttaattggcattgctaaaacagga
agtggaaagactattgcttttctgttgcccatgttcaggcacatcatggatcagagacca
ctagaagaaggagagggtccaatagctgttattatgactcctactcgagagctggcttta
cagattacaaaggagtgtaagaagttctcaaagacacttggggttagagttgtatgtgta
tatggaggaacaggaataagtgaacagattgctgaactgaaaaggggtgctgaaataatt
gtttgcacacctggccgcatgattgacatgttagcagctaacaatggtcgagtgacaaat
cttcggagagtgacatatgttgtccttgatgaagctgatagaatgtttgatatgggcttt
gagcctcaggttatgcgcattgtagacaatgtgagacctgatcgccagactgttatgttc
tctgctaccttccctagagccatggaggctttagctcgtcgaatattaagcaagccaata
gaagtccaagttggtggtagaagtgtcgtctgctctgatgtggaacaaaaagtgattgtc
atagaggaggagaacaagtttttgaagttacttgaattattgggacattatcaggaacaa
ggagctgtcattatatttgtagataaacaagaacatgctgatggattgctgaaagactta
atgagagcctcttatccctgcctgtctcttcatggaggtattgaccagtatgacagagat
agcataatcaatgattttaagagtggagtgtgcaagcttcttgtggccacatccgtggca
gcccgaggtcttgatgtaaaacatcttatgcttgtagtcaactacagctgccccaatcat
tatgaggattatgtgcacagagcaggcagaactggacgagcaggcaacaaaggttatgcc
tataccttcattactgaagatcaagcacggtatgctggtgatataattaaagctttggag
ttgtcaagtaatccagttcctcctgagctggagaagctttggaccgacttcaaagatcag
cagaaggctgaggggaaaacaattaagaagagcagcgggttttctgggaaaggattcaag
tttgatgaaactgaggaggctttggctaatgagcggaagaaattacaaaaagctgcactt
ggcttgcaagattcagatgatgaagatacggcagtttcaattgacgagcagattgaaagt
atgttcaattcaaagaaaagagtaaaggacatggcatcatctggcgggacatctaacgtt
cctgccccaacagcaggaaatgcagaaaagttagaaattgctaagagattggcattgaga
atcaatgcacagaagaatcttggagccgaggcacaagtattggtctcttttcaatttaag
gatgtgatgcagcaagctacaaatgctatcctgaggggtggcaccattcaggctccaacc
gtatctgcaaagaccattgcagaacaactggctgagaagatcaatgccaagctgaattac
gtgcccatagagaaacaagaggaggaaaaacaggaaggcggacaaaatgaatcttttaaa
agatatgaggaagaactggagatcaatgatttcccacagactgccaggtggaaagtaaca
tcaaaggaagccctgcacagaataagtgaatattctgaagctgccattacaatcagagga
acatactttcctccaggcaaagagcccaaggagggagaacgaaaaatttacttggccatt
gagagtgccaatgaattggctgtgcagaaagcaaaggcagaaatcaccaggcttatcaaa
gaagagcttatcagactgcaaaattcataccaaccaaccaacaaaggaagatacaaagtt
ttataa
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