Podarcis muralis (common wall lizard): 114606445
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Entry
114606445 CDS
T06059
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03022
Basal transcription factors
pmua03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114606445
09124 Replication and repair
03420 Nucleotide excision repair
114606445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmua03021
]
114606445
03400 DNA repair and recombination proteins [BR:
pmua03400
]
114606445
Transcription machinery [BR:
pmua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114606445
DNA repair and recombination proteins [BR:
pmua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114606445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
Matrix
Pyocin_S
Motif
Other DBs
NCBI-GeneID:
114606445
NCBI-ProteinID:
XP_028604533
LinkDB
All DBs
Position
11:complement(32110735..32127331)
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AA seq
395 aa
AA seq
DB search
MDDEPERTKRWEGGYERTWEVLKEDESGSLKASIEDILFKAKRKRIFEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPTRLTCTLKLLEYFVEEYFDQNPISQVGIIVTKGKRAEKLTEL
SGNPRKHTAALKKAVDMSCLGEPSLYNALNLAAQTLKHMPGHTSREVLVIFSSLTTCDPS
NIYDLIKSLKAVKIRVSIIGLSAEVRVCTVLARETGGTYHVILDESHYRELLMHHVSPPP
ASSSSESSLIRMGFPQHTIASLTDQDAKPSFSMAQLENSNDPGLTLGGYFCPQCRAKYCE
LPVECKVCGLTLVSAPHLARSYHHLFPLDAFQEVPLEQYVGERYCQGCHGEITDQHVYIC
KVCQSAFCVECDLFAHDTLHCCPGCIHKHPAPPCV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaaccagagagaaccaaacggtgggaagggggttatgaaagaacttgggaa
gttcttaaagaagatgaatctggatcattgaaagccagcatagaggatattctttttaag
gccaaaagaaaaagaatctttgagcatcatggacaagttcgacttgggatgatgcgtcac
ctgtatgtagtggttgatggatcaagaacaatggaagaccaagatttaaaacctaccagg
ctaacttgtaccctaaagttactggaatattttgttgaagaatattttgaccaaaatccg
attagtcaggttggcattattgtgactaagggcaaaagagctgaaaaacttactgagctt
tcagggaatccgagaaaacacacagctgctttgaaaaaagctgtagatatgtcttgtcta
ggagagccatctttatataatgccttaaatttggctgcacagacattaaagcatatgcca
gggcatacaagcagagaagtcttagtaatattcagcagtctgacaacatgtgatccttcc
aatatttatgatctaattaagagtttaaaggcagttaagatcagagtgtctattattggc
ctttctgctgaagttcgagtttgtactgtacttgcccgggaaactggtggaacctatcat
gtcattttagatgaaagccattatagggaacttctgatgcaccatgtcagtccaccacca
gctagttcaagttctgaaagttcgcttattcgaatgggctttcctcagcacaccattgca
tctttgactgatcaggacgcaaagccatcttttagcatggcgcagctagaaaacagcaat
gatccaggtcttaccctgggaggatatttctgcccccaatgcagagccaaatactgtgag
cttcctgtggagtgcaaagtttgtggtcttacactagtatctgcaccccatctggctcga
tcttaccatcacctatttcctttggatgcctttcaggaagtcccactggaacagtatgta
ggagaacgctattgccaaggatgccatggagaaattacagatcagcatgtctatatatgt
aaagtctgccagagtgcgttttgtgtagaatgtgatctttttgctcatgatactctgcac
tgctgtccgggttgcattcacaagcatcctgcccctccctgtgtgtga
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