Prunus mume (Japanese apricot): 103323399
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Entry
103323399 CDS
T03196
Name
(RefSeq) ABC transporter B family member 4-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103323399
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmum02000
]
103323399
04147 Exosome [BR:
pmum04147
]
103323399
04090 CD molecules [BR:
pmum04090
]
103323399
Enzymes [BR:
pmum01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
103323399
Transporters [BR:
pmum02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
103323399
Exosome [BR:
pmum04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103323399
CD molecules [BR:
pmum04090
]
Proteins
103323399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_22
ABC_ATPase
AAA_21
RsgA_GTPase
Zeta_toxin
AAA_15
AAA_5
AAA_30
DUF815
nSTAND1
DEAD
Motif
Other DBs
NCBI-GeneID:
103323399
NCBI-ProteinID:
XP_008223620
LinkDB
All DBs
Position
LG2:complement(34823101..34829918)
Genome browser
AA seq
1290 aa
AA seq
DB search
MAEENPADGNVNKEQATTASNGHSAVEDSQNNPQDTSKSKEDATKTVPYYKLFSFADSLD
YLLMSVGTISAIGNGVCMPLMTIIFGNVVNSFGGTENNKEVVDAVSKVALKYVYLAVGAA
SASFLQMSCWMVTGERQAARIRSLYLKTILRQDVGFFDKETNTGEFVGRMSGDTVLIQEA
MGEKVGSFIQLIATFVGGFVIAFIKGWLLTLVMLSSIPLLVLSGAIIGIIISKVASRQQT
AYAVAATVVEQTIGSIRTVASFTGEKQAIANYNNSLIKAYNSGVQEGLASGFGIGSVMLI
IMCSYALAVWFGAKMILEKGYTGGEVMNVVFAVLTGSMSLGQASPCMSAFAAGQAAAYKM
FETINRKPEIDAYDTNGQQLHDIRGDIELKDVCFSYPARPDEQIFHGFSLSIPSGSTAAL
VGESGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLKWIRQKIGLVSQEPVLFTSSIK
DNIAYGKDGATTEEIRAAAELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRVAIARAI
LKDPRILLLDEATSALDAESERIVQEALDRIMINRTTVIVAHRLSTVRNADTIAVIHRGI
IVEKGPHSELIKDPEGAYSQLIRLQEMSTVLEQSAVNDHERLSSVDSQRHSSQRFSNLRS
ISRGSSGRGNSSRHSFSNSYGVPIGVLETASAEPDIPASTSSTVPPEVSLSRLAYLNKPE
IPVLLLGTIAAAANGVILPIFGIMISSIIKTFFEPPHQLRKDSKFWALIFLVLGVGSFIA
QPSRQYLFSVAGCKLIKRVRSMCFEKVVYMEVSWFDDPEHSSGAIGARLSVDAASLRGLV
GDALGLLVQNLATAIAGLCIAFVANWQLALIILVLLPLLGVNGYFQVKFMKGFSADAKKM
YEDASQVANDAVGSIRTIASFCAEEKVIELYQKKCEGPIKTGIRQGLISGIGFGLSFFFL
FSVYACSFYAGARLVAAGKTTFSDVFRVFFALTMTAVGVSQSGSLAPDLSKGKSSASSIF
AILDRKSKIDSSDESGTTIENVKGEIELRHVSFKYPTRPDVPIFQDLCLTIHHGETVALV
GESGSGKSTVVSLLQRFYEPDSGHITLDGIEIQKLQLKWLRQQMGLVSQEPVLFNDTIRA
NIAYGKEGNATETEIIAAAELANAHKFISSLQQGYDTVVGERGIQMSGGQKQRVAIARAI
MKAPKILLLDEATSALDAESERVVQDALDRIMVDRTTVVVAHRLSTIKGADVIAMVKNGV
ITEKGKHETLISIKDGIYASLVALHASASS
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggaaaatcctgcggatggaaatgtaaacaaggagcaggccacgacagcatcg
aacggccactcagcagtggaggactctcaaaacaacccacaagatacaagcaagagcaag
gaggatgccaccaaaacagtaccatattacaagcttttctcctttgctgattccttggat
tacctgttaatgtctgttggtacaatcagcgctattggaaatggggtctgtatgcctcta
atgaccataatctttggaaacgtggttaattcttttggaggaactgagaataataaagaa
gtggttgatgcagtttccaaggttgctctaaagtatgtctacttggctgtgggagcggct
tcagcttcatttctacagatgtcttgctggatggtcactggagagagacaggctgctcga
ataagaagtttatacttgaaaacaatattgaggcaagatgttggcttttttgataaagaa
actaacactggggaatttgttgggaggatgtcaggtgatactgtgctcattcaagaggcc
atgggcgagaaggtaggaagttttatccagttaattgcaacattcgtaggaggctttgtt
atagcatttattaagggatggcttctcacccttgtcatgctatcttctattccccttctt
gtcctctctggtgccatcataggcatcattatttcaaaggtcgcatcccgtcaacaaact
gcttatgcagtggcagcaactgtggtagagcagaccatagggtcaatcagaacagttgca
tcttttacaggagaaaagcaagctatagctaattacaacaactccttaattaaagcttac
aactctggtgtgcaagagggtttggcatctgggttcggtattggttcggtcatgcttatt
ataatgtgtagttatgctttggctgtatggtttggcgcaaagatgatacttgaaaaagga
tatacaggaggagaagtcatgaatgtagttttcgctgtgttgactggctccatgtctctt
gggcaggcatccccatgcatgagtgcctttgcagctggacaagctgcagcttataagatg
tttgagacaattaacagaaagccagagattgatgcttatgacactaatgggcaacaatta
catgatatccgtggagacatagaactaaaggatgtttgttttagttatcctgcaagaccg
gatgaacaaatattccatggattttctctctcaatacctagtggttcaactgctgctttg
gttggagagagtggaagtggtaaatcaactgtaatcagtttgattgagagattttatgac
ccccaagctggcgaagttcttattgatggcataaatctcaaagagttccagctgaaatgg
atcagacagaaaataggcctagtcagccaggaacccgttttatttacctctagcattaaa
gataatatagcatatgggaaggatggtgcaaccactgaagaaataagggctgctgccgag
cttgccaatgctgctaaattcatagacaaattgcctcagggactagacacaatggttggt
gagcatggaactcagctatctgggggccaaaagcagagagttgctatagctagggcaatt
ctcaaggacccaaggattctacttttagatgaagccacgagtgctcttgatgcagaatct
gagagaattgtgcaggaagcactggacagaattatgatcaaccggactactgtcattgta
gcccaccgcctgagcacagtaaggaatgctgacaccatagctgttatacatcgaggaata
attgttgaaaaaggtccacattctgagctaattaaggaccctgaaggagcatatagccaa
cttataaggttgcaagaaatgagcaccgtgttagaacagagtgctgtaaatgatcacgaa
aggcttagcagtgtggattctcaaagacactcaagtcaaagattttcaaacttacgatcc
ataagccggggatcatctggaagaggaaatagtagtcgtcattccttctcgaactcatat
ggtgtacccataggtgtccttgaaactgcatctgcagagcctgatattcctgcttcaaca
tcatcaacagtgcctccagaagtctcacttagccgcctggcttatctgaacaagccagag
atcccagtattattactaggtactatagctgcagcagccaatggggtgatcttacctatt
tttgggataatgatatccagtattatcaagaccttctttgagccacctcatcaactccgt
aaggattcgaagttttgggcattaatctttcttgttcttggagtgggatctttcatagca
cagccatcaagacaataccttttttctgtggccgggtgtaagttaataaaacgagtccgg
tcaatgtgctttgagaaggtggtttatatggaagtaagttggtttgacgatcctgagcac
tcaagtggtgcaattggtgcaaggctttctgtagatgcagcttctctgcgtggtcttgtt
ggagatgctctaggtttgctggttcagaatttagcaactgcaattgctgggttgtgcatt
gcttttgtagcaaattggcaactcgctcttataatccttgttctgctgcctctattagga
gtaaatggttattttcaagtcaagttcatgaaaggattcagtgcagatgcaaagaaaatg
tacgaggatgcaagtcaagtagccaatgatgcagtggggagtattagaacaattgcttcc
ttttgtgctgaagagaaggtgattgaattgtaccagaagaaatgcgaaggccctattaag
acagggataagacaagggttaatcagtgggattggttttgggctatcattcttttttctc
ttttctgtgtatgcctgcagtttttatgctggagcccgacttgttgcagcaggcaaaaca
acattctctgatgttttccgggttttctttgctctcacgatgacagctgtcggagtgtct
cagtcaggttccctcgcccctgatttaagtaaaggaaagagctctgcttcttccatattt
gcaattcttgaccggaaatcgaaaatagactccagtgatgaatctggaacaactatagaa
aatgtgaagggagaaattgaacttcgccatgtcagtttcaagtatccaactagacctgac
gtgccaatcttccaggatctttgcttgactattcatcacggcgagacagttgctttggtt
ggagaaagtggaagtgggaaatcgacagttgtatctttgttgcagagattttatgaacct
gattccggtcacattacattagacggaattgaaatccaaaagctacagttgaagtggttg
agacagcaaatgggactggtgagccaggagcctgtgttgtttaatgacactatccgagcc
aacattgcatatggaaaggaagggaatgcaacagagactgaaattatagctgcagcagaa
ttggccaatgctcacaagttcattagtagtttacaacagggttatgatacagtagtaggg
gagcggggtattcaaatgtctggtggacagaagcaaagggtggcaattgcacgagctata
atgaaggcaccaaagatactactgctagatgaagccacaagtgctcttgatgctgaatct
gaacgagtggttcaagatgcattggaccgaatcatggtggatcgaaccacagtcgtggtt
gcccatcggttatccacgattaagggtgcagatgtaatcgcaatggtgaaaaatggagtc
attacagagaaaggaaagcatgaaactttgatcagtatcaaggatggcatttatgcttct
ttggtagcattgcatgcaagtgcctcatcttag
DBGET
integrated database retrieval system
