Prunus mume (Japanese apricot): 103323797
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Entry
103323797 CDS
T03196
Name
(RefSeq) 3-isopropylmalate dehydratase large subunit
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00290
Valine, leucine and isoleucine biosynthesis
pmum00660
C5-Branched dibasic acid metabolism
pmum00966
Glucosinolate biosynthesis
pmum01100
Metabolic pathways
pmum01110
Biosynthesis of secondary metabolites
pmum01210
2-Oxocarboxylic acid metabolism
pmum01230
Biosynthesis of amino acids
Module
pmum_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
103323797
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
103323797
09110 Biosynthesis of other secondary metabolites
00966 Glucosinolate biosynthesis
103323797
Enzymes [BR:
pmum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
103323797
4.2.1.35 (R)-2-methylmalate dehydratase
103323797
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Motif
Pfam:
Aconitase
Motif
Other DBs
NCBI-GeneID:
103323797
NCBI-ProteinID:
XP_008224035
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Position
LG2:complement(38088264..38095221)
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AA seq
509 aa
AA seq
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MAACSTVAPPSTSFISNKKDLGLSAVSSASPLSSQKCKRTSKTICSVTAPKQSERKPATT
GSVKTGMTMTEKIFARASEKTQLSPGENVWVNVDVLMTHDVCGPGSFGIFKKEFGQNAKV
WDREKIVIIPDHYIFTSDERANRNVDILRDFCTEQNIKYFYDIKDLSNFKANPDYKGVCH
VALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKLLLKVPPTLRFV
MDGEMPDYLLAKDLILQIIGEISVSGATYKAMEFVGSTVESLSMEERMTLCNMVVEAGGK
NGIVPAXXXTYKYLEDKTSVPYEPVYSDDKARFLSEYRFDISKLEPLVAKPHSPDNRALA
RECKDVKIDRVYIGSCTGGKTEDFMAAAKVFLASGKKVKVPTFLVPATQKVWMDVYSLPV
PGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARLNEPKVCVSTTNRNFPGRMGHK
EGEIYLASPYTAAASALTGYVTDPREFLQ
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttgctccactgttgctccaccatccacctctttcatcagcaacaagaaagat
ttgggtctctctgctgtctcttccgcatcgccgctttccagtcagaaatgcaagagaaca
tccaagacaatctgttcggtcactgcaccaaaacaatcagagcgcaaacctgccactact
ggctcggtcaagacgggaatgacgatgactgagaagatatttgctagagcttctgagaaa
acccagttgagccctggtgagaatgtttgggttaacgtcgatgttttgatgacacatgat
gtttgtggccctggttcctttgggatcttcaagaaagagttcggccagaacgcgaaggtt
tgggaccgtgaaaagattgtaattatacctgaccattatatatttacaagtgatgaacgt
gcgaatcgtaatgtggatattttgagggatttctgcacagaacaaaacatcaagtacttc
tatgatatcaaggatctgagtaattttaaggctaaccctgattataagggtgtgtgccat
gttgctcttgctcaagaaggccattgcaggcctggagaggtcctactgggtacagattct
cacacctgtactgcgggagcttttggacaatttgctactggaatcgggaacactgatgca
ggttttgtgttgggcactgggaagctcctgctcaaggtacctccaacattgagatttgtg
atggatggtgaaatgcctgactatttgcttgccaaagatttgattctgcaaattattggt
gaaatatctgtttctggtgcaacatataaagctatggagtttgttggcagcactgttgaa
agcttatctatggaagaaaggatgacattatgcaacatggttgttgaggctgggggtaaa
aatggtattgttcctgcnnnnnnnnccacatataagtaccttgaggataagacttctgta
ccctatgaacctgtatacagtgatgacaaagcaagatttctgtctgagtacagatttgat
atctcaaaactagagccattggtggcaaagcctcattctcctgataatcgtgctttggca
agagaatgcaaagatgtgaaaattgacagagtatatattggttcttgtactggtggaaaa
acagaggattttatggctgcagctaaagtttttctagcatcaggcaaaaaggtcaaagtg
ccaacatttcttgtgcctgctacccaaaaggtttggatggacgtgtatagtcttccagta
ccaggatctggtggcaagacttgctcacagatatttgaggaagctggatgtgacacgcct
gcgagtcccagttgcggtgcttgcttaggtggtcctaaagacacctatgctcgcttgaat
gaacctaaggtatgtgtctcaacaacaaacaggaacttccctggccgaatgggccacaag
gaaggcgagatatatcttgcttccccctacacggctgctgcatctgctttgaccggttat
gtcactgacccgagagagtttttgcagtag
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