Prunus mume (Japanese apricot): 103324251
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Entry
103324251 CDS
T03196
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 2
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103324251
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmum01002
]
103324251
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103324251
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103324251
Peptidases and inhibitors [BR:
pmum01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103324251
Ubiquitin system [BR:
pmum04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103324251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
103324251
NCBI-ProteinID:
XP_008224512
LinkDB
All DBs
Position
LG2:41336214..41342214
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AA seq
967 aa
AA seq
DB search
MGKKVKKKARAAPQKDKWIAADSPKKAPQPSNPSVKNGDDAVSVPKEKKPCPHVDKGVDL
NKLSAKIGSSELVRCEDCREVALDRRGGKGKGKHGKKKGSSSVDSKSESKAIWVCLECGH
YSCGGVGLPTTPQCHALRHARQTRHPLVIHFENPQLRWCFSCSMLIKIDKMEENSEQKDV
FSDVVKLIKGHSSEEPSVNVEDVWFGNGSVTSDIKSANNISSDLDGRGGYMVRGLVNLGN
TCFFNSVLQNILAIDRLRGYFLNVDAFSGALTISLKKLFTETKPEAGFRNVINPRAFFGC
VCSKAPQFRGYQQQDSHELLRCLLDGLCTEELSMRKRISSSRENGNSSNPGPTFVDAVFG
GQISSTVSCVECGHSSTVYESFLDLSLPVPTRKCPPKTAQPTSRAKKTKLPPKRSGKVRS
KINKDKSSAPSSSVATPSTRSEVSSQPQSGSTDPDVVEQWGLVMKNLSAVQESENEQVFE
DAAEQTSTLLNDCTWLDYLDMGNMSDDNDFVSQNNDASNVQDSENKNALNDILLQPDSES
GNQVSTLNGEPNVKPDFSLVNPWEEELPLQVQGSEVLLLPYKEECSVTEEIIGREDEASS
SVVGGGQDEFDGFGDLFNEPEVAAGPTARPSVGEGGTETGFVASESDPDEVDDSDSPVSV
ESCLAHFIKPELLANENAWHCENCSRTLQRQRLEVKKQVKSSAQILINGCETRAESDSLS
LNMGLCPADVRNLSNGNLNSSTGCNHFGEDLHDGKINCSSIENGRSDKLNAAVRQQEEGN
NEMKDALPVQSNTSDCNNTCSRESYIDQAIESCADEPRTAGCTSDNVPQTYSGILDGKHE
SEESEDEEINSKCVKVKRDATKRVLRLSKLNGHVSFREKIDLRPYMDSRSTDGEKYEYRL
IGVVEHSGTMRGGHYVAYVRGGERSRGKAEKENNGNVWYYASDAHVRQVSLDEVLHCEAY
ILFYEKS
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaagttaagaagaaggcaagggcggctcctcaaaaggacaagtggattgca
gctgattccccaaagaaagctccccaaccaagcaacccaagtgttaagaatggtgatgat
gcagtttcagttccaaaagagaaaaaaccttgtcctcatgttgacaaaggtgtagatttg
aataaattgtctgctaaaattgggtcctcagaacttgttaggtgcgaagattgtagggaa
gtggcgcttgataggagagggggtaaaggaaagggcaaacatggtaagaagaaaggaagt
tcttcagtggattcaaaatccgagtcaaaagccatttgggtttgtttggaatgtggtcat
tattcttgtggaggggttggactgcctacaacccctcaatgccatgcacttcggcatgcg
aggcaaactcgtcacccgttagtgatccacttcgaaaaccctcagttgcggtggtgcttc
tcttgtagcatgcttattaaaattgataagatggaagagaatagtgaacaaaaagatgtg
ttttcggatgttgtgaaattaataaagggtcattcatcggaggagccatctgttaatgtt
gaggatgtgtggtttggtaatggcagtgtgacaagtgacatcaaatcagctaacaatata
tcaagtgatttggatgggagaggtggttatatggtgagagggttagttaatcttggtaac
acttgcttctttaattctgtcttacagaatattctagctatagataggctgcggggttac
ttcttaaatgttgatgcattttctggagctcttactatttccttgaagaaactctttact
gaaacaaaaccagaggcaggatttaggaatgtgataaacccaagagcgtttttcgggtgt
gtctgttccaaggctccccagtttaggggttatcagcagcaagacagtcatgaattgctt
cgttgcttactggatggcttgtgcactgaggagttgagtatgaggaaacgtataagttct
tcccgggaaaatgggaattcatcaaatccaggtcctacttttgtggatgctgtatttggg
gggcaaatatcaagtaccgtttcttgcgtcgaatgtggccactcctctactgtctatgag
tcatttttagatctgtcactgccagttccaaccaggaaatgcccacctaagacagctcaa
cctacctctcgagcaaagaagacaaagttgccacccaagaggagtggaaaggttcggtca
aaaattaacaaggacaagagttctgcaccatcatcaagtgttgcaaccccatcaaccagg
agcgaggtttctagccagccacagtccggttcaactgacccggatgtggttgaacaatgg
ggtttagttatgaagaatctctctgctgtccaagaatctgaaaatgaacaagtctttgag
gatgcagcagagcaaacatcaactttgttgaatgactgtacgtggttggattatcttgat
atgggaaatatgtcagatgacaatgatttcgtttcacaaaacaatgatgcttcaaatgtt
caagattctgaaaacaagaatgcacttaatgatatcttgctacagcctgactctgaatct
ggtaatcaggtttctacgcttaatggggaaccaaatgtaaaacctgacttttctttagtg
aatccttgggaggaagagctcccattacaggttcagggttctgaagttttgttgcttcca
tataaagaagagtgttctgtcactgaggaaatcataggaagagaagatgaggcctcttca
tcggttgtgggtggtggacaagatgaatttgatggttttggggacttattcaatgagccg
gaggttgctgcagggcccactgcaaggccctctgttggcgagggaggaacagaaactggt
ttcgtagctagcgaatctgatccagatgaagttgatgatagtgattctccagtgtctgtt
gagagttgtttggctcatttcataaagcctgagcttcttgccaatgaaaatgcttggcat
tgtgagaactgttccagaactcttcaacgccaaaggttggaagtaaagaagcaggtaaaa
tcttcagctcaaattttgataaatggatgtgagactagagcggaaagtgattcactgagt
ttaaatatgggcctgtgccctgctgatgtcagaaatcttagtaatgggaatttgaatagc
agtactggttgtaatcattttggtgaagacttgcatgatgggaaaataaattgctcatca
attgagaatggtcgatcagataagctgaatgctgctgttcgtcaacaagaagaaggaaac
aacgagatgaaagatgcacttccagtgcaatcaaatacttcagattgcaataacacttgc
agtcgagaaagttacattgatcaagcaattgagtcttgtgctgacgagcctagaactgca
ggatgtacctctgacaatgttccacagacttattctgggatattagatggtaaacatgaa
tcagaagaaagtgaagacgaggaaataaattccaaatgtgtgaaggtgaagagggatgcg
actaaaagggtcctccgcttaagtaaattgaatggccatgtcagtttcagagaaaaaatt
gatcttagaccatatatggattccaggtccacagatggagagaagtatgaataccgccta
attggggttgtggagcattctgggacgatgagagggggccactatgttgcatatgtgaga
gggggtgaaaggagcagaggaaaagctgagaaagaaaataatgggaatgtgtggtattat
gctagtgatgcacatgtgcgtcaagtttccctagatgaggttcttcactgtgaggcctat
atcttattctatgaaaaaagttga
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