Prunus mume (Japanese apricot): 103325629
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Entry
103325629 CDS
T03196
Name
(RefSeq) nuclear-pore anchor
KO
K09291
nucleoprotein TPR
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103325629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103325629
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103325629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
TMF_TATA_bd
BRE1
Motif
Other DBs
NCBI-GeneID:
103325629
NCBI-ProteinID:
XP_008226037
LinkDB
All DBs
Position
LG3:complement(7526063..7547451)
Genome browser
AA seq
2036 aa
AA seq
DB search
MPLFVSDEDFSRHGNDATWVADKADAFIRDLQTELETFRAQNDAASITAEQTCSLLEQKY
LSLSDEFSKLESQYAQLQSSLDHRLSEVAELQSQKHQLHLQSIEKDGEIERFKTEVSELH
KSKRQLIELVERKDFEISEKNATIKSYMDRIVYSSDNAAQREARLSEAEAELARTKASCT
RLSQEKELIERHNVWLNDELTEKVDSLIGLRKTHADVEADLSYKLADVERQFNERLNAEL
STLNKLVELYKESSEEWSKKAGELEGVIKALETHLSQVENDYKERLEREESARNQFQKEA
ADLKAKLDKCEAEIETSRKANELNLLPLSSFTTDAWMNSYESTDMVEVNRAVVXXXXAGV
SGTALAASLLRDGWSLAKMYAKYQEAVDAFRHEQLGRKDSEAILQRVLYELEEKAEVILD
ERVEHERMVEAYSMINQKLQNSISEQANLEKTIQELKAEIRRHERDYTFARKEISDLQRE
VTILLKECRDIQLRGTSSGHDIHDYGTAAVVEMNAESDADIVISEHLLTFKDINGLVEQN
AQLRSLVRNLSDQLDNREMEVKEKFEMELKKHTDEAASRVAAVLQRAEEQGHMIESLHSS
VAMYKRLYEEEHKLHSSSPHLAEAAPEERRADVKLLLESSQEATRKAQDQAVEQVKCLEE
DLAKTRSEIISLRSERDKLALEANFARERLESFMKEFEHQRKETNGVLARNVEFSQLIVD
YQRKLRESSESVQTAEERCRKFTMEVSVLKHEKEMLEHAEKRACDEVRSLSERVYRLQAS
LDTIQSAEQIHEEARAAERRRQEEYTKQIEREWADVKKDLQEERNNARTLTLDREQTIQN
AMRQVEEMGKELSNALNAVASAESRAAVAEAKLIDLEKKIRSSDIKVVDIDGETGSSSLT
SDEAVVALHAAKEEIEKLKEEVKANKDHMLQYKSIAQVNEDALKQMEFAHENFKIEAEKL
KKLLEVELLSLRERVSELEHESGLKSQEVASAAAGKEEALSSALSEITSLKEEISAKISL
NASLEIQISALKEDLEKEHQRWHSAQANYERQVILQSETIQELTKTSQALAVLQEEAAEL
RKLVDALKSENNELKSKWEFEKAMLEESKNVAEKKYNEINEQNKILHSQLEALHIQLAER
DRGSFGTSASTGSDTSGDAGLQNVISYLRRTKEIAETEISLLKQEKLRLQSQLESALKAS
ETAQSSLHAERANSRSLLFTEEEIKSLQLQVREMNLLRESNIQLREENKHNFEECQKLRE
MSQKANIETQNLERLLRERQIELEACRKELEMLKTEKDQLEKRVHELLESYKNIDVEDYD
RVKNDVRQLEEKLEKKVSRVEEVEKLLSEKQETVSHLEQDLSNYRLDLTEKEKRINETLQ
VEASLRSDGEKQKKAILQYKRRCEILLKEKEELSKENQALSRQLEEVKQGKRSSGDTSGE
QAMKEEKDKKIQTLEKLVERHRDDMRKEKEENRIEKAKRIRTEKAVKDSYTNVEQDKTRF
MNELEKHKQAVRQLSDELEKLKHAKDSLPEGTSVVQLLSGSILDGLATAYSLAVENFEKS
AHSVHNDFGTHGVPTDTPPVSDASLAATSGTGQAPTVVSSMSPATGLASKSTEESEKRLT
LTLPKSNVETRKTGRKLVRPRLVRPEEPQGDVEMSEMEGSRNVAKHAPSNEMEVQGNVTS
TQPLLRKRHASSSAFESREESSNQAETGPDVAAPVLKKSKGSDSPQGSEGQPSAISENLC
SVPVKDEAIDVTELPQGSNEEAVGDTEKEEIETTGEKVEEPNERQFDGSNQVESQPDKHI
GLEENVDGSGGTEMMCDDGAKDQVELDNQQSNEFGGDREEGELVPDVSELEGGDTIGSPE
IGEGQPEPVATPGASPARGDDEGVAASSVVDIGEVNSPEVLNDEKNDEVVTEEAADGSDK
SNDGNDQTGMETDQGAEAASVIIENTSSSTPTEVNVPTQVSASVTAETEEVKQVSPVTNT
STTISITERARQRSVIRQAGAGAPSPPIRGRGRPVGRGRGVRGRGRARGAAPSDQG
NT seq
6111 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcttcgtctccgacgaggacttctcccgccacggaaatgacgccacttgggtg
gcggacaaggccgacgcgttcatccgcgacttacagacggagctagagacgttcagggcc
cagaacgacgccgcttccatcacggccgagcagacctgctccctcctcgagcagaagtac
ctatcactctccgatgaattctccaagctcgagtcgcaatatgcgcagcttcagtcctcc
ctcgaccaccgcctctccgaggtcgccgaactccaatcccaaaagcaccagctccatctc
caatcgattgagaaggatggggagatagagaggtttaagacggaggtgtcggagctgcac
aaatcaaaaaggcagttgatagagttggtggagcggaaggatttcgagattagtgaaaaa
aatgccaccatcaagtcttatatggacaggattgtttattcgtcagacaatgctgcacaa
agggaggcccgtttaagtgaagctgaggcagaattagcacgcaccaaggcttcatgtact
cgtctatcacaggagaaagaacttattgagaggcataatgtctggcttaatgatgagtta
acagagaaagttgacagtctcattgggctacgtaaaacgcatgctgatgttgaggcagat
ttgtcttataaacttgcagatgttgagagacaattcaatgagcggttaaatgctgaactt
tcaacattaaataagcttgttgaactatataaagaaagttctgaggaatggtccaagaag
gcaggagagcttgagggtgtgatcaaggctctggagacacatttgagtcaagtggaaaat
gattacaaagagagacttgagagggaagaatcagcaagaaatcaatttcagaaggaagct
gcagatctgaaagcaaaacttgacaagtgtgaagcagaaatcgaaacgagcaggaaagcg
aatgagctaaatcttcttccactcagtagttttaccacagatgcatggatgaattcatat
gaatctactgacatggttgaggttaatcgtgcggttgtnnnnnnnnnnnctgctggtgtt
tcaggaacagcattagcagcttcacttctacgggatggttggagtcttgcaaagatgtat
gcgaagtaccaagaggctgttgatgcctttcgtcatgagcagttgggaaggaaggactct
gaggcaattttgcaacgggttctatatgaattagaggagaaagcagaagtcattttggat
gaaagagtggaacatgagagaatggttgaggcatattctatgatcaaccaaaaactgcag
aattcaatttctgaacaggcaaacttagagaaaaccatccaggagttaaaggcggagata
aggaggcacgagcgtgactacacatttgctcgaaaagagatctctgatctccagagagag
gttacaatccttctgaaagaatgtcgagatatacagcttcgtggcacatcttctggtcat
gatattcatgactatggtactgctgctgtggttgagatgaatgctgaatctgatgctgac
atagtcatatctgaacatcttttgaccttcaaggacataaatggactagttgagcagaat
gcccagctcaggagtcttgttcgcaatctttctgaccagcttgacaatagggaaatggag
gtcaaggaaaagtttgaaatggagctcaagaaacatactgatgaagctgcctctagagtt
gcagcagtgttacaaagagctgaagagcaagggcacatgattgaatcccttcactcctcc
gttgcaatgtacaaaagattatatgaagaggagcataaacttcattcatctagtccccac
ttagcagaggcagctccagaagaaagaagagccgacgttaaacttctccttgagagttcc
caggaagctaccagaaaggcccaagaccaggctgtagaacaagtgaaatgtctggaggaa
gatttggcaaagaccaggagtgagatcatatcattgcggtcagagcgtgacaaattggct
ttggaagcaaattttgctcgagaaagacttgagagcttcatgaaagaatttgagcatcag
agaaaagaaacaaatggtgttttagcaaggaacgttgagttctctcagttaatagttgac
taccaacggaagctgcgtgaaagttctgaatctgtgcaaactgctgaggagcgttgtagg
aagttcactatggaggtatctgttttgaagcatgaaaaagagatgttggaacatgctgag
aagagagcttgtgatgaagttcgtagtttgtcggagagggtctatagacttcaggctagt
ttagacactattcagagtgccgagcaaattcatgaggaggcaagagctgctgagaggaga
agacaagaagagtatacaaaacaaatagagagggagtgggcagatgtcaaaaaagatcta
caagaagaacgcaacaatgcccgcactctcactcttgaccgtgagcagaccatacaaaat
gccatgagacaagtcgaagaaatgggcaaagagttgtctaatgcattgaatgctgttgca
tcagctgagagtagagctgctgtagccgaggctaaactgattgatctggagaaaaagata
agatcctcggatattaaggttgtggatattgatggtgaaactggatcttcctctttgacg
agtgatgaggctgtggtggcattgcatgctgcaaaggaagagatcgaaaaattgaaagag
gaagtgaaagctaataaggatcacatgctacagtataagagcatagctcaggtgaacgaa
gatgcattgaaacagatggaatttgcccatgaaaacttcaagattgaggctgaaaaactg
aagaaattgctcgaagttgaacttctttctctgagagagagggtctctgaacttgaacac
gagtctggtttgaagtctcaagaagttgcttcagcagctgcagggaaggaagaagccctt
tcttctgctttatctgaaattacaagtctaaaggaagaaatctcagctaaaatttcccta
aatgcgtcactggagattcagatatctgctttgaaagaagacttggagaaagaacatcag
aggtggcattctgctcaggctaactatgaaagacaggttatcctccagtcggagacaata
caggagttgactaaaacatcgcaagctttggctgtgctccaggaagaagctgcagagttg
cgtaaattggttgatgcacttaaaagtgaaaataatgaactgaagtctaagtgggaattt
gagaaggcaatgttagaagaatcaaagaatgttgctgagaagaagtacaatgaaatcaac
gaacagaacaaaatactgcacagtcagcttgaggctttgcacattcaactggctgagaga
gatcgtggatcatttggaacttcagcaagcactggttcagatacttctggggatgctggt
ttacaaaatgtaataagttatcttcgacggacaaaagaaattgcagagacagagatttct
ttgttgaaacaagaaaaacttcggttacaatcacaacttgagagtgccctcaaagcttca
gaaacagcccaatcatcacttcatgctgagcgtgcaaattcaagatcattattgttcact
gaggaggaaataaaatccttacaacttcaggttagagaaatgaacttacttcgggaaagc
aatatccaactaagagaagaaaacaagcacaattttgaggaatgccagaaattgcgtgaa
atgtcacaaaaggctaatattgagactcagaacctagagagattgttaagggagagacag
attgagttggaagcctgtagaaaagaacttgaaatgctaaagaccgagaaagatcaattg
gaaaaaagggttcatgagttacttgaaagttataagaatattgatgtggaagattatgat
cgtgtgaagaatgatgttcgtcagttggaggaaaaattggagaagaaggtttctcgtgta
gaagaagtcgagaaacttctttcagaaaagcaggagactgtatcacatctggagcaagat
ctttctaactatagattggatctgactgagaaagaaaaaaggataaatgaaactttgcaa
gttgaggcaagtctaagatcagatggcgagaagcaaaagaaggcgatccttcagtataag
aggaggtgcgagatactcttaaaggaaaaggaggaactcagcaaggagaatcaagctctt
tctaggcagttggaggaagtcaaacaagggaaacgatcttctggggatactagcggagaa
caggccatgaaggaagagaaagacaaaaaaattcagactctggaaaagcttgtggagagg
catagagatgatatgagaaaggagaaggaagaaaaccggatagagaaagcaaagcgcata
cggactgagaaggcagtgaaggattcctacactaatgttgagcaggataaaacaaggttc
atgaatgaactggagaagcataagcaggctgtaaggcagctttcagatgaacttgaaaag
ctgaagcatgccaaagacagtctccctgagggtacctctgttgttcaacttctttctgga
tccatactggatggccttgccactgcctacagcttggctgttgaaaattttgaaaagtca
gcacattcagttcacaatgactttggaactcatggtgttcctacagacactcctccagtt
tcagatgcttcattagcagctacttcgggtactggtcaagcaccaactgttgtgtcctca
atgagccctgcaacaggtttggcatccaaatcaactgaagaaagtgaaaagagattgact
ttgactttgcccaaaagcaatgttgaaacgcgtaaaacagggaggaagttggttcggccc
cgtcttgtaagacctgaagaaccacaaggtgatgtagagatgtcagagatggaagggagc
cgcaatgtggccaagcatgccccatcaaatgaaatggaagttcaaggcaatgttacttca
acacaaccgctgcttcgaaaacgtcatgcttcttcttctgcttttgagtctcgggaggaa
tcaagtaaccaagcggaaactggtcctgatgtggcagcacctgtgttgaagaagtccaaa
ggttcagattctccacaagggagtgaagggcaaccatctgctatttctgaaaatctttgc
agtgttccagttaaagatgaagctattgatgtcactgagttgcctcaaggttcaaatgag
gaagctgttggtgatactgagaaggaagaaattgagactacaggagagaaggttgaagag
ccaaatgaacgacagtttgatggttcaaatcaagtagaatcacaacctgacaagcatatt
ggtttagaagaaaatgttgatggatcaggtggaactgagatgatgtgtgatgatggagcc
aaggatcaggttgagctggacaaccaacagtccaatgaatttggaggagacagagaagag
ggagagttggtccctgacgtttctgagcttgaaggtggtgatacaattggcagtcctgaa
ataggggaaggtcaacctgagcccgttgcaactcctggggcttccccagccaggggcgat
gatgaaggggttgctgctagttctgttgtggatattggtgaggtaaattctccagaggtt
ctaaatgatgagaaaaatgatgaagttgtaactgaagaagctgccgatggttctgataaa
tcaaatgatggtaatgaccaaactgggatggagactgatcagggagccgaagctgcctca
gtaattattgagaatacgtcatcaagtactcctacggaagttaatgttccaacgcaagtt
agtgcgagtgttactgcagaaacagaagaggtgaaacaggtatctcctgtgactaataca
tcaactaccatttctataacagaacgagcgaggcagagatccgtgatcagacaggctgga
gctggagccccttctccaccaatcagaggtcgtggaagaccagtgggacgtggacgaggt
gtgcgtggacgtggacgtgcacgtggggcagcacctagtgatcaaggttaa
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integrated database retrieval system
