KEGG   Prunus mume (Japanese apricot): 103329876
Entry
103329876         CDS       T03196                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    103329876
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmum03400]
    103329876
DNA repair and recombination proteins [BR:pmum03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     103329876
SSDB
Motif
Pfam: HD HD_assoc_2 LMSTEN DUF1059
Other DBs
NCBI-GeneID: 103329876
NCBI-ProteinID: XP_008230621
LinkDB
Position
LG4:21107998..21112269
AA seq 471 aa
MGAYNNDGVLSPIYSLGSSHDVRISKHVHDNVHGNIYLDPLSLKFIDTEEFQRLRELKQL
GVTHMVYPGGVHSRFEHSLGVYWLAGEAVQKLKNYQGSDLDIDRFDLQTVKIAGLLHDVG
HGPFSHLFEREFLPQVRSGFHWSHEDMSVKMVDHIVNQHHIDVDPQMIKRVKEMILASSE
FAMPRSSREKRFLYEIVANGRNGIDVDKFDYIVRDCRACGLGCNFEFQRLMETMRVMDDE
ICYRAKDYLTVHKLFATRADLYRTVYTHPKVKAIELMVVDALVKANDYLDIASHIEDPSQ
YWKLDDTIIRTIETAPNEELKEARDLILRIRRRNLYQFCNEYAVPKDKMENFKNVTAQDI
VCSQKSGVTLKEEDVAVCNVRIDLTRGRHSPLESINFFQDYDSEEKFTIREDHISHLLPT
SYQDMIVRVYSKKPELVGAISEAFENFQLKTYGVKAQVHATPEKKKRRILS
NT seq 1416 nt   +upstreamnt  +downstreamnt
atgggtgcttacaacaacgacggcgttttgtcgccaatatacagtctcggttcctcccac
gacgtcagaatctccaagcacgtccacgacaatgtccatggcaacatttaccttgatccg
ctctctttgaagttcatcgataccgaggagtttcagaggcttcgtgaactcaaacaactg
ggagttacgcacatggtttatccagggggagtgcattccagattcgagcattcgcttggt
gtctattggcttgctggtgaagctgttcagaagctaaaaaattatcagggctcggatctt
gatattgaccgctttgatctccagaccgtaaaaattgcaggacttttgcatgatgttggc
catgggcctttcagtcacttgtttgaacgcgagtttcttccccaagttcggagtggtttc
cattggtctcacgaggatatgtcagtgaagatggttgaccacattgttaatcagcatcat
attgatgttgaccctcagatgattaaaagagttaaagagatgatactggccagctctgaa
tttgcaatgccaagaagctcaagggagaagcgttttctgtatgaaattgttgcaaatggc
cgtaatggaattgatgtggacaagtttgattatattgtccgtgactgccgcgcttgtggg
ctgggatgtaactttgagtttcaaagattaatggagacaatgcgggttatggatgatgag
atctgctatcgtgccaaagattatctcactgtccacaagttatttgctactcgagctgat
ttgtatcgaacagtttatacacatccaaaagtaaaggccatagagcttatggtggttgat
gccctggtgaaagcaaacgattatctagacattgcctctcacattgaggatccctctcaa
tactggaagttagatgacaccatcattagaactattgagacagctccaaatgaagaacta
aaggaagctagggacttaatcctgcggattaggaggagaaatctttatcagttctgcaat
gagtatgctgtacccaaggataaaatggaaaatttcaaaaatgtcaccgctcaagatatt
gtttgttctcagaaaagtggagtgacattgaaagaggaggatgttgctgtttgcaacgtc
aggattgatttgactcgtgggagacatagtcctcttgaaagtatcaactttttccaggat
tatgacagtgaggagaaattcactatacgtgaggaccacattagtcacttgctgcctaca
tcatatcaagatatgatagtgagggtctactccaaaaagcctgagctggttggagcaatt
tctgaggcttttgaaaactttcagttaaaaacatatggggtcaaggcacaagtacacgca
acaccagagaaaaagaaacgtcgtatcttatcatga

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