Prunus mume (Japanese apricot): 103329910
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Entry
103329910 CDS
T03196
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12-like
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103329910
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmum01002
]
103329910
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103329910
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103329910
Peptidases and inhibitors [BR:
pmum01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103329910
Ubiquitin system [BR:
pmum04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103329910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
103329910
NCBI-ProteinID:
XP_008230662
LinkDB
All DBs
Position
LG1:complement(11462041..11479163)
Genome browser
AA seq
1114 aa
AA seq
DB search
MTVMTPAPIDQPEDEEMLVPHSDLPENNHQPMEVVAQPETANNVENQPVEDPPSSRFTWR
IDNFSRMNTKKLYSDIFVVGGYKWRVLIFPKGNNVDHLSMYLDVADSASLPYGWSRYAQF
CLGVVNQIHNKYSVRKDTQHQFNARESDWGFTSFMPLSDLYDPSRGYLVHDTLIIEAEVL
VRRVVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSQ
SIPLALQSLFYKLQYSDNSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLE
GDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLD
RENGKYLSPEADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED
IKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEQDIAE
HLRGRLKKEQEEKEHKKKEKAEAHLYTIIKVARDENLVEQIGKDIYFDLVDHDKVRSFRI
QKQTPFNVFKEEVAKEIGIPVQFLRFWFWAKRQNHTYRPNRPLTPVEETQSVGQLREVSN
KVHNAELKLFLEVELGLDLHPIAPPDKTKDDILLFFKLYDPEKEELRYVGRLFVKSTGKA
AEILSKLNEMAGYAPEEEIDLYEEIKFEPNVMCEPIDKKFTFRACQLEDGDIVCFQKPTP
VENGEHLRYPDVPSFLDYVHNRQVVHFRSLEKPKEDDFSLELSKLHTYDDVVERVAQQLG
LDDPSKIRLTSHNCYSQQPKPQPIKYRGVERLTDMLVHYNQTSDILYYEVLDIPLPELQG
LKTLKVAFHHATKEEVVIHTIRLPKQSTVGDVINDLKTKVELSHPDAELRLLEVFYHKIY
KVFPHSEKIENINDQYWTLRAEEVPDEEKNLGPNDRVIHVYHFTKDTAQNQMQIQNFGEP
FFLVIHEGETLAEIKARVQKKLQVADEEFAKIKFIFSFLHLQDSDIVSSRFQRRDVYGAW
EQYLGLEHSDSAPKRAYAANQNRHTFEKPVKIYN
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcatgacccccgcccctattgatcaaccagaggacgaggagatgctcgtcccg
cactcggatttgcccgaaaacaatcaccaacccatggaagttgttgcacaacctgaaact
gctaataatgtggagaaccagccagtggaggatcctccatcatcaagattcacgtggaga
attgacaatttttctaggatgaatacaaagaagctttattcagatatatttgtcgttggt
ggctataaatggcgtgtgcttatttttcctaagggaaacaatgtagatcatttgtctatg
tatttggatgttgcggattcagcaagtttgccatatggctggagtagatatgcacagttt
tgcttgggggtcgtcaatcaaattcataacaagtattcagtacgaaaagacacacagcat
cagttcaatgcgcgagaaagtgattggggtttcacatccttcatgcctcttagtgatctt
tacgatcccagtagagggtatcttgtgcatgatacacttataattgaagctgaagttctc
gttcgtagggttgtagattactggacatatgactcgaaaaaggagacaggttatgtgggg
cttaagaaccaaggagcaacttgctacatgaactctctcctccagactttgtatcatatt
ccttatttcagaaaggctgtttaccatatgcccacaactgagaatgatttgccatcgcaa
agcatacctttggccctgcagagtctattttacaagcttcagtacagtgacaatagtgtg
gcaacaaaagagctgacgaagtcttttggatgggacacgtatgattcatttatgcagcat
gacgtacaagaactcaatagggttttgtgtgaaaaacttgaagacaaaatgaagggaact
gttgtagagggaactatacagaagttgttcgaaggacaccatatgaactacattgaatgc
atcaacgtggactacaaatcaacaagaaaggaatcattttatgaccttcagcttgatgtc
aaaggttgtcgtgatgtatatgcttcttttgataagtacgtagaagttgaacgtctcgag
ggtgataacaagtatcatgctgaacagtatggattgcaggatgctaagaaaggtgttttg
tttattgactttcccccggtgcttcaacttcagttgaaacgatttgagtacgactttatg
cgggacacaatggtgaagattaatgatcgttatgagttcccattgcaacttgacctcgat
cgagagaatggaaaatatttatcacctgaagctgataggagtgttcgtaacctttacaca
cttcacagtgttttggtacacagtggtggggtgcatggtgggcactattatgcctttatc
aggccaacactttctgatcagtggtataaattcgatgatgagagggtcacaaaagaagat
ataaagagggcactagaggagcagtatggtggtgaggaagagttaccacagacaaaccct
ggattcaataacactcctttcaaatttacgaagtactcaaatgcgtacatgctggtgtac
atacgtgaaagtgacaaagataaaataatctgcaatgtggatgagcaggacatcgctgaa
catctaagggggaggttaaagaaagaacaagaagaaaaggaacacaagaagaaagaaaag
gcagaggcacacctatatactattataaaggttgcccgggacgagaaccttgtcgagcag
attgggaaggatatttattttgatcttgttgatcatgacaaagttagaagttttcgtatc
cagaagcagacgccttttaacgtatttaaggaggaggttgcgaaagagattggtatacca
gtgcaatttctgcgattttggttttgggcgaagcgtcaaaaccatacatatcgtcctaac
cgtccattgacgcctgtggaggaaacacaatctgttggacagttgagggaggtatcaaac
aaggttcataatgcagaactaaagttattcttagaagtagagcttgggctggatttacac
cctatcgctccacctgacaagacaaaggatgacattctgcttttctttaagctttatgat
ccagaaaaagaagaactacgatatgttggaaggctttttgtgaagagtactggtaaggca
gctgaaatattgtcaaaattaaatgaaatggctggctatgctcctgaggaagagattgac
ctttatgaggaaattaagtttgagccgaatgtcatgtgtgaacccatcgacaagaaattc
acatttcgagcctgccagcttgaggatggagacattgtttgctttcagaagcccactcca
gttgaaaatggagaacatctccgctatccagatgtcccatcttttctggactatgtgcac
aaccgtcaagttgttcacttccgatctcttgagaaacccaaagaagatgatttctcccta
gaattatcgaaactccatacctatgatgatgttgtggaacgagttgctcagcaacttggt
ttggatgatccatccaaaattaggcttacatcgcacaactgttactcacaacaacccaaa
ccccagccaattaagtatcggggggttgaacgcttgactgatatgctggtccactacaat
cagacttcggatatattgtactatgaagtattggacatccctctgcccgaattacaaggt
ttgaaaactctgaaagtcgcattccatcatgctactaaggaagaagttgttattcatacc
ataagactgccaaaacagagcactgtgggggatgtaattaatgaccttaaaactaaggtt
gaattgtctcatccagatgcagaacttaggttgcttgaagttttctatcacaagatttac
aaggtttttcctcacagtgaaaagattgagaacataaatgatcaatactggacgttacgg
gccgaagaggttcctgacgaagagaaaaatcttggtcctaatgatcgtgtaattcatgtc
taccatttcactaaagacacagctcagaaccaaatgcaaattcaaaactttggggaacct
tttttcttggtcatacatgaaggtgaaactttggctgaaattaaagctcgagtacaaaag
aaattacaggttgcggatgaggagtttgccaagattaaatttattttttcctttttgcat
ctccaggactctgacattgtgtctagtcggtttcagagaagagatgtttacggtgcttgg
gagcaatatcttgggctggaacactctgacagtgctcctaaaagagcgtatgcagctaat
cagaatcgccacacatttgaaaagccagtaaaaatctacaactag
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integrated database retrieval system
