Prunus mume (Japanese apricot): 103334209
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Entry
103334209 CDS
T03196
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00280
Valine, leucine and isoleucine degradation
pmum01100
Metabolic pathways
Module
pmum_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
103334209
Enzymes [BR:
pmum01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
103334209
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Gene cluster
GFIT
Motif
Pfam:
MCCA_BT
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATPgrasp_ST
RnfC_N
ATP-grasp_4
TetR_C_36
ATP-grasp_3
DUF2118
Motif
Other DBs
NCBI-GeneID:
103334209
NCBI-ProteinID:
XP_008235377
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Position
LG6:2129654..2135025
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AA seq
734 aa
AA seq
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MASVATILRRKLSHKPFHFQLLTVRAFSASEPQRIEKILIANRGEIACRIMRTAKRLGIQ
TVAVYSDADRHSLHVKSADEAVHIGPPPARLSYLKASSIIDAAIRTGAQAIHPGYGFLSE
SAEFAQLCEDKGLTFIGPPASAIRDMGDKSASKRIMGAAGVPLVPGYHGKDQDIDLMKLE
ADKIGYPVLIKPTHGGGGKGMRIVQSPDEFVDSFLGAQREAAASFGISTILLEKYITQPR
HIEVQIFGDKHGKVLHLYERDCSVQRRHQKIIEEAPAPNVSNDFRTHLGQAAVSAAKAVG
YHNAGTVEFIVDTVSGQFYFMEMNTRLQVEHPVTEMIVGQDLVEWQICVASGEHLPISQS
QVPLSGHAFEARIYAENVPKGFLPATGVLHHYHHVPVSPQVRVETGVEQGDTVSMHYDPM
IAKLVVWGENRAAALVKLKDCLSKFQVAGLPTNINFLLKLANHRAFQNGDVETHFIEHFK
DDLFVDPSNSLLVEKVLGAARFSATLAAACLIEKENSLFRANLRGGDSIISIWYSSPPFR
VHHCARHTVELEWENEYDSSGSKSLKLSTTYKPDGSYLIETEEESFPGLEVNVTCIGNHE
FRVEADGVNMDVSLAVYSKDQTKHIDIWYGSHHHHFRQKTGLELSDEDETEHKPRFDKSS
YPQGTVAAPMAGLVVKVVVKDGTKVEEGQPILVLEAMKMEHVVKAPSAGYVRGLHLAAGQ
QVSDGGILFSIKEE
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtggccaccatcctccgccggaagctttcccacaaacccttccatttccag
ttactgacagtaagagcattctctgcctctgagccgcagaggatagagaagattctgata
gcaaacagaggcgaaattgcttgcaggatcatgaggaccgccaagaggctcgggattcaa
accgtcgccgtttacagcgacgccgataggcattcgcttcacgtcaaatcggccgacgaa
gctgtgcatatcggcccgcctccggctcggctcagctacctcaaggcctcatcgattatc
gacgcggccattcgcactggtgcgcaggctatacatcctggttatggttttctgtcagag
agtgctgagtttgctcaactttgtgaagataagggtcttacatttattggacctccagca
tctgccatccgagacatgggtgataaaagtgcttcaaagagaataatgggtgcggcaggg
gtacctctggtgcctggatatcatggtaaagaccaagatattgatctaatgaagttagaa
gccgacaagattggatacccagtcttaataaagccaactcatggaggtggagggaagggt
atgcggattgttcaaagtccggatgaatttgttgactctttcctgggagcacaacgtgag
gctgctgcttcttttggcataagcacgatattgctggagaaatatattacacagccaagg
cacattgaagtccagatatttggggacaaacatgggaaggttctacatttgtatgagaga
gattgcagcgtccagagaagacaccagaaaatcattgaagaagctccagctccaaatgtg
tcgaatgacttccggactcacttgggccaagctgctgtatctgctgccaaggcagttggt
tatcacaatgctggcactgtggagtttatagttgatacagtctcaggccaattttatttc
atggagatgaatacccgacttcaggttgagcatcctgtgactgaaatgattgttggccaa
gatcttgtagagtggcagatttgtgttgcaagcggtgaacatcttcccattagtcagtca
caggtcccattatcaggtcatgctttcgaagcccgaatatatgctgaaaatgtaccgaaa
ggattccttccagcaacgggggtccttcatcactatcatcatgttccagtctcaccacaa
gttcgagttgagactggagttgaacagggagacactgttagcatgcattatgatcctatg
attgctaaactcgtagtatggggagaaaatcgtgctgcggcattggtaaaactgaaggat
tgcttatcaaagtttcaggttgcaggtttaccaaccaacatcaattttcttctaaaactt
gctaaccatcgggcatttcaaaatggcgatgtggaaacccattttattgaacactttaaa
gatgacctgtttgttgaccctagtaattcactgttagtggagaaagtgcttggtgctgct
agatttagtgctacactggcagctgcgtgtctcattgaaaaggaaaattctttattcaga
gcaaatcttcgtggtggcgacagcataatctccatatggtattcttctccccctttcaga
gtccatcattgtgctaggcatacagtggaacttgagtgggagaatgaatatgatagcagt
ggctcaaagtcattgaaactttcaaccacttataaaccagatgggagctatctgattgag
acagaagaagagagtttcccaggtttggaggtcaacgtaacttgtataggcaaccatgaa
ttcagagtcgaagctgatggtgtaaacatggatgttagcttagctgtttattccaaggat
cagaccaagcacattgatatatggtatggatcacatcatcatcatttcaggcagaaaacc
ggccttgaattgtctgatgaagatgaaacggaacataaacccagatttgacaaatcatca
taccctcaggggactgttgctgcgcccatggctggtttggttgtcaaggttgtggtgaag
gatgggacaaaagtggaggaaggacaacctatattagttttagaggcaatgaagatggag
catgttgtaaaggcaccatcagcgggctatgtccgcgggcttcatctagcagctggtcag
caggtttctgatggtggtattctcttcagtatcaaggaggagtga
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