Prunus mume (Japanese apricot): 103337907
Help
Entry
103337907 CDS
T03196
Name
(RefSeq) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103337907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103337907
03036 Chromosome and associated proteins [BR:
pmum03036
]
103337907
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103337907
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103337907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
103337907
NCBI-ProteinID:
XP_016650988
LinkDB
All DBs
Position
LG7:11522756..11529081
Genome browser
AA seq
1225 aa
AA seq
DB search
MFGSVDILGQSYRSPFMSQSVAGQTRNTSNDPSAPQIFGSTTPFGPQTGSPIFGVTSNGV
SAAAQSSTPFPSSTTFGASFSTDFGNTMSTFGASSTPAFSSSSSPSIVGFWLFVPFGSTC
TPAFGSDGMPAFGATSIPAFGGTSPFGSTTQPSHPAFGSSIFGSSTPFGGSSQPPFGATS
SAARFPFRSTEAATGVSSSPGIGTGLGFYISSTRASGSPNSTFGTSSNPTSAASSTPGLP
CGSTEAATGVSSFPSVGCGHGFYVSSTPASCSSSSLFRTSGNPTSAASNTPGFTSGCTTA
TGISSFPSVGFRHGLYVSSTPVSGSSSSTFGTSSNPTSAVSITPGFGSTTQPSHPTFGSS
IFGSSTPFCGSSQPPFGATSSAALRSTTSFPFRSTEAATGVSSFPSVGSGHGFYVSSTPA
SCSSCSPFRTSSNPTSAASNTPGFTCGCTAATGVSSFPSVGSGHGFYVSSSPASGSSSST
FGTSSNPTSAVSITPGFGSTTQPSHPTFGSNIFGSSTPFGGSSQPPFGATSSAALRSTTS
PSFRSTEAATGVSSSPVFGPALGFYISSTPASGSSSSTFGTSSNPTSAASSTPGFTCGST
EAATGVSSFPLVGSGNGFYVSSTPASCSSCSLLRTSSNPTSAASNTPGFTCGSTEAATGI
SSFPLVSGHGFYVSSTPASGSSRSPFGTSSNPTSAVSNTPGFGYLSTPSFTFSFLPSFGK
STSTFPSSQFGPSCPSGAQSSPFGAQSKTFGNTAFGISASGAQLWGSRVPPYTTTTEPDD
YVGLETRGDLQSISAIPIYRDKTHEELRWQDYQLGDRGGHVPAGGSCFPLSTSNILNPAP
TFAQTSSSLFNTSTPSNIFAPQIPSFSFRGSRTSSIPITSSTFPLSTSPNLFTTSSSSPS
VFRQASSPSLFSSSDPSTLAFPAPAPRTDLTSNSGLFNSPFGVQSTTCGNTACGISASGG
QFGGSRVAPYTKIAGPDGGSLSGLYQSICGMRIYGDKSHEELRWQDYQLGDRGGRALVGG
NCFDLSTTQSNVLNPAPAFIQTSSSLLNTSTLPNIFAPQIPAFTPTAFGSSFTPLISPNI
FIPSASSFSVPGQISSPSLFSSSVTPTSMFAFPAPAPTTSPFNSSPINPVASIAQTGGTA
GLTTTSSGGLFTIPSGNTHISHEERFPLEEKRRLSIMIARSNRKKNGQNVRMMPSVPFFF
CHFVAIGGAQAKLVNAMDVLQEALL
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttcagttgacattcttgggcaatcatatagaagcccatttatgtcccagtca
gttgctggacagacccgcaacactagtaacgatccttctgctccccagatctttggtagc
acaaccccatttggtccacaaacagggagtcccatatttggggtcacttcgaatggtgtg
tctgctgcagcccaatcttctacaccctttccttcctccacgacattcggtgcctcattc
tcaacagattttggaaatacaatgtctacttttggagcatcttctactcctgcattcagt
agttcatcgtcgccctcaattgttggtttctggttgtttgttccctttggttcaacatgc
accccagcctttggttctgacggcatgccagcttttggtgctacaagcatcccagccttt
ggtggtacaagcccttttggaagcacaactcaaccatcacatccagcatttgggagcagt
atatttggttcctccacgccatttggtggatcaagtcagccaccctttggtgctacaagt
agtgcagcgcgttttccatttagaagcacagaagctgccactggggtttcaagttccccc
ggaattggaactgggctaggattttatatttcaagtacccgagcttctggttcgcctaac
tccacttttggtacttcaagcaatcctacttctgctgcttcaagtacccctggattgccg
tgtggaagcacagaagctgccactggggtgtcaagtttcccctcggttggttgtgggcat
ggattttatgtttcaagtaccccagcttcttgttcctctagctccctttttcgcacttca
ggcaatcctacttctgctgcttcaaatacccctggatttacgtctggatgcacaactgcc
actgggatttcaagtttcccctcggttggatttcggcatggactttatgtttcaagtacc
ccagtttctggttcctctagctccacttttggtacttcaagcaatcctacttctgctgtt
tcaattacccctggatttggaagcacaactcaaccatcacatccaacatttgggagcagt
atatttggttcctccacgccattttgtggatcaagtcagccaccctttggtgctacaagt
agtgcagcgcttcgttccacaacaagttttccatttagaagcacagaagctgccactggg
gtttcaagtttcccctcggttggatctgggcatggattttatgtttcaagtaccccagct
tcttgttcctcttgctccccttttcgcacttcaagcaatcctacttctgctgcttcaaat
acccctggatttacatgtggatgcacagctgccactggggtttcaagtttcccctcggtt
ggatctgggcatggattttatgtttcaagttccccagcttctggttcctctagctccact
tttggtacttcaagcaatcctacttctgctgtttcaattacccctggatttggaagcaca
actcaaccatcacatccaacatttgggagcaatatatttggttcttctacgccatttggt
ggatcaagtcagccaccctttggtgctacaagtagtgcagcgcttcgttccacaacaagt
ccttcgtttagaagcacagaagcggccactggggtttcaagttcccccgtatttggacct
gcgctaggattttatatttcaagtaccccagcttctggttcgtctagctccacttttggt
acttcaagcaatcctacttctgctgcttcaagcacccctgggtttacgtgtggaagcaca
gaagctgccactggggtttcaagtttccccttggttggatctgggaatggattttatgtt
tcaagtactccagcttcttgttcctcttgctcccttttacgcacttcaagcaatcctact
tctgctgcttcaaatacccctggatttacgtgtggaagcacagaagctgccactgggatt
tctagtttccccttggtttctgggcatggattttatgtttcaagtactccagcttctggt
tcctctaggtccccttttggtacttcaagcaatcctacttctgctgtttcaaatacccct
ggatttggttatttaagtactccatctttcaccttttcattccttccttcttttgggaag
tcaacttctacatttcctagcagccaatttggtccttcatgtccttctggagcgcagagt
tctccatttggagctcaatcaaaaacatttggaaacactgccttcgggatatcagcttct
ggggcccaactttggggaagtagagttcctccttacacaacaacaactgaaccagatgac
tatgttggtctagaaactaggggagacctccagtcaatatcggcgatcccgatttataga
gacaaaactcacgaggaactgagatggcaggattatcaattgggggatagaggtggacat
gttcctgctggagggagttgttttcccttgtcgacctcaaacattttgaatcctgcacca
acatttgctcaaacatcttcaagtctttttaatacctcaactccatcgaatatatttgct
ccacaaattccatcctttagttttagaggctctaggacctcatctataccaatcacttca
tcaacttttcctctctcaacttcacccaatcttttcacaacttcatcatcatctccttca
gtattcagacaagcttcatctccatctctttttagttcatcagacccatctacattggca
tttcctgctccagctccaagaacagatttgacatctaattctggcctgttcaattctcca
tttggagttcaatcaacaacatgtggaaacactgcctgtgggatatcagcttctgggggc
caatttgggggaagtagagtggcgccttacactaaaatagctggaccagatggtggttca
ttaagtgggttataccaatcaatatgtgggatgcggatttatggagacaaaagtcatgag
gaactgagatggcaggattatcaactgggggatagaggtggacgggctcttgttggtggg
aactgctttgacttgtctaccacccagtcaaacgttttgaatcctgctccagcatttatt
caaacttcttcgagtcttttgaatacctcaactctacctaatatatttgctccacaaatt
ccagcctttactcctacagcctttggatcctcatttacaccattgatttcacccaatatt
tttataccttcagcatcatctttttctgtacctggacaaatttcatctccgtctcttttt
agttcatcagtcacgcccacatctatgtttgcatttcctgctccagctccaacaacttcc
ccatttaattccagcccaatcaatcctgtagcttctattgcacaaacaggtggtactgct
ggactaactaccacttcctctggtgggctgtttacaattccctctggtaatacacatata
tcccatgaagagaggtttccattagaggaaaaaaggaggttgagcattatgattgcaagg
tctaatcgcaagaaaaatggtcaaaacgtgagaatgatgccctctgtccccttcttcttc
tgtcatttcgtggccataggcggtgcacaggcaaaactagtaaatgctatggacgtccta
caagaagcattgctttag
DBGET
integrated database retrieval system
