Prunus mume (Japanese apricot): 103338965
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Entry
103338965 CDS
T03196
Name
(RefSeq) transcriptional activator DEMETER-like isoform X1
Organism
pmum
Prunus mume (Japanese apricot)
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Gene cluster
GFIT
Motif
Pfam:
RRM_DME
Perm-CXXC
HhH-GPD
EndIII_4Fe-2S
Motif
Other DBs
NCBI-GeneID:
103338965
NCBI-ProteinID:
XP_008240460
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Position
LG8:complement(200663..215926)
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AA seq
1999 aa
AA seq
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MKFGGGFLLPQDEDLRFMDSWVPATPEKPIPLKRHPIPIPVNPLGNHLQGANWQQTGISR
EHVQMGASYNDVTQTVSPNGQLQRNGGHNGYDGSLAEKNQMINHVACSYSTGSFTQLLCP
DNASWNNNPITQLLHDKTAFVASADRNLSRNVDLAVNTPLIPKLHPQLGNQGNNSGCSLL
TNQNCSNGSYSSSTVMSRSLVMDFPSQVDASQTDSNSVHWLFSNQNHCSSSNPLSNGDSS
SLICQNGFPVQFLPSYDLNSSPRTEADAASCIASQHPFTTDQANNVENNELFAILKSLTD
ESASVEKDKQVKLVMSIGDEAIQKHGDELLQNIVESSSAAISTPYKKHKDSDWEGDRGID
LNKTPQQKPPKRRKHRPKVIREGKPKRTPKPATPKNTESKESQPAKRKYVRKNVPKESPS
QKSDVTRETADHNSGKVAKSCRRVLDFGLENTMDENQCNTVRQQEELQQGNKRIIDLTFE
TQGTHMGTGTNQVFKTKPAEPMGLQHELMVENQMPGTMSNPTPFMNHIPNNYTFLPERKP
SAAPFATTKDMHMKNLNVTRRHVENDISDLCQRRCRDGYIPIQQHSHAEGIGQDVIRAKT
NCENLQKTKENINQGGSQSVLTAFSLPSEGRGSKRDYFRTIEHTHLSTNHPPSSLLCHDI
FQFNGHQRNSCTLSKEFSESHKKQKFENGCLSICDMPRKFTPVEDCLGKVERKGENNVKS
IGKVIERQNNTLLSSYIESSRMIERQNKGINKFTSDRYTHSIASGNNFLNQQTSSKSHSC
QGFAVVHSFSTRSTIETCDQLTSSPPRKSFQPGNGQVFQTRKNNTSAKKKTVGSNISKSV
SSGTDKVPQEQDSSYDYQQPSAKAIGFPGRTRCSIPVDVIINQFNGLNLNGSCSKFLKHE
RNALVPYKGDGAVVPYERFIKKRKPLPKVELDPETNRIWNLLMGKEGSGGIEGNHKEKEK
YWEEERKVFQGRVESFIARMHLVQGDRRFSKWKGSVVDSVIGVFLTQNVSDHLSSSAFMS
LAARFPPKSSNHQAHDKVVTNILVEEPEVQMKSPDDATKWHEEISSQPIYNQMSMALNES
AEIQRDSETIGTERNLVEAHSQCLEEEYVSSQDSFESSVTQGAVGIRSYSVSNSEVEDPI
TGCQSKKIHMSISTNQQMEKVTKFQDLYHQVNGSSILYDGSKNGYIECGQLKTRSDRIDD
LNGISSFTNLLNLYNETVQVPVAPSKSNQLHAYPDFGELEPWRFANFSEEIISSWPSTAS
RFNVKKDEKNKSRNEELSGSVVNSSVQQNILWPSQETPKMDPYASFRQQSTDQQNNSQPR
SSNGCNQPSYYSHQCEGNQNFQLEKTSVREPVKHTEPLLGKKSGSMQHVQNVNELKKNSC
SIVDSISAVNKQIHMENQSVDSNLQEQLYSYGQSHNEANTNISKGRKGRAGSDKKNAVDW
DTLRKQAQANGRKKERNKETMDSLDYEALISANVKDISDAIKERGMNNMLAERIQEFLNR
LVREHGSIDLEWLRDVPPDKAKDYLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAV
RLGWVPLQPLPESLQLHLLEMYPMLESIQKYLWPRLCKLDQLTLYELHYQMITFGKVFCT
KSKPNCNACPMRGECRHFASAFASARLALPGPEEKSIVSSSVSVEAEINPTVAVTPMSLP
PPVSIAEINPTIAVTPMSLPPPENNSLQKASTETNKCEPIIEEPATPEQEFTELSQSDIE
DLFYEDPDEIPTIKLNMEEFTATLQNYMQENMELQEGDMSKALVSLNREAASIPTPKLKN
VSRLRTEHQVYELPDSHPLLEGMDKREPDDPSPYLLAIWTPGETANSIQPPESRCGSQDQ
NKMCNEKTCFSCNSIREENAQTVRGTILIPCRTAMRGSFPLNGTYFQVNEMFADHDSSHS
PIDVPRGWIWNLPRRTVYFGTSVSTIFKGLSTEGIQYCFWRGYVCVRGFDRKTRAPRPLI
ARLHFPASRLTKTKNEEKR
NT seq
6000 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttggagggggatttttgcttccccaggatgaggatttacgcttcatggattct
tgggtaccggcgactccggagaagccaattccgttgaagcgtcatccgattccgatccca
gtcaacccccttgggaaccacctgcaaggagcaaattggcaacaaactggaatttcaagg
gagcatgtacaaatgggggctagctacaatgacgtgactcaaacggttagcccaaatggt
caactacagagaaatggagggcataatggttatgatggaagtctggctgagaaaaatcaa
atgataaatcatgttgcgtgctcctacagtacaggctccttcacacagttgctctgccct
gacaacgcaagttggaacaataatccaattacccaactgctgcatgataagacagctttt
gttgcctctgcagacaggaatctgagcagaaatgtggacttagcagtgaacacacctcta
attcctaagttgcatcctcaattgggcaaccaaggaaacaactcaggctgctccttgcta
accaaccaaaattgcagcaatggttcatattcttcaagtacagtgatgagcaggtccttg
gttatggattttccttctcaagttgacgcaagtcagactgattccaactcagttcattgg
ttatttagcaaccaaaatcattgctcaagttcaaatccattgagcaatggtgacagctca
tccttgatatgccagaatggtttccctgtacaattcctaccaagctatgatctaaactcc
tcaccaagaacagaagcagatgctgcctcatgtattgccagccaacacccattcacaaca
gatcaggccaacaatgtagagaacaacgagctttttgcaatactgaaatccttgacagat
gaaagtgctagtgtggaaaaggacaagcaagtgaaattagttatgtctataggagatgaa
gcaattcaaaaacatggtgacgaactcttgcagaacattgtggaatcatcatctgcagcc
atttctacaccatacaaaaaacacaaagattctgactgggaaggtgacagagggattgat
ctaaacaagacaccacagcagaaaccacccaagcgaagaaaacacaggcccaaggtaatc
agagaaggaaagcccaaaaggactccaaagcctgcaactccaaagaatacagagtctaag
gagagccagccagcaaagaggaaatatgtaagaaagaatgtcccaaaggaatccccaagt
caaaagtcagatgttacaagggaaacagcagaccataattctggaaaagttgcaaaatca
tgcaggagagttctagattttggtttggaaaacaccatggatgaaaaccaatgcaacaca
gttcgtcagcaagaggagttgcaacaagggaacaagagaattattgatttgactttcgag
actcaagggacgcatatgggcactggaaccaaccaggtttttaaaacaaagccagctgag
ccaatgggcctacagcatgaattgatggtagaaaaccagatgccaggaactatgagtaac
cctacccctttcatgaaccatattccaaataactatacattcctgccagaaaggaaacca
tctgcagccccatttgctacaacaaaagacatgcatatgaaaaatttgaatgtcacaagg
agacatgtggaaaatgatatttcagatttatgccagagaagatgtagagatggatacatt
cccatccagcaacatagccatgctgaaggaataggccaagatgtcattcgagcaaaaacc
aactgtgaaaaccttcagaagactaaagaaaatatcaaccagggcggctctcaatcagta
ctaaccgctttctcccttccaagtgaaggaaggggatccaagagggattacttccgtact
attgaacacacacatctttctaccaatcatccacctagttcattgttgtgccatgatata
tttcagtttaatggccatcaaagaaatagttgcactctcagcaaagaattttcagaaagt
cataagaaacagaaatttgagaatggatgcttgagtatctgtgacatgcctaggaaattt
acaccagttgaggactgtctgggaaaagttgaaagaaagggggaaaataatgtcaaatca
attggaaaagtgatagagagacagaacaataccttattgagttcttacattgaaagtagc
agaatgatagagagacagaacaaaggaatcaacaagtttaccagtgacaggtacactcac
tccatcgcttctgggaataattttctgaatcagcagacctcatccaaatcacattcctgc
caaggattcgctgtagtgcatagcttttctacccgttccacaattgagacatgtgaccag
cttacctcatcacctcccagaaaatcctttcaaccgggaaatgggcaggtatttcaaact
cgcaaaaataatacgtcagcaaagaagaagaccgtgggatccaatatatcgaaatctgtt
tcatcaggtacagataaagtcccgcaagaacaggattcctcatatgattatcagcaacct
tctgcaaaagcgatagggtttccgggaagaactagatgtagtataccagtagacgtcatc
ataaatcagtttaatggtctgaatctcaatggaagctgcagcaaatttctaaagcatgaa
cgaaatgcacttgtcccatacaagggagatggtgcagttgttccctatgagaggtttatt
aagaaacgtaagccactgcctaaagtagagcttgacccagaaacaaataggatatggaat
cttttgatgggcaaggaaggaagtggagggattgaaggaaatcataaggaaaaggagaag
tattgggaagaggaaagaaaggttttccaaggacgagttgagtcattcatagcacgcatg
caccttgttcaaggagacagacgtttttcaaaatggaaaggatcagttgttgactcggtg
attggagttttccttactcagaatgtttcagaccatctatcaagctctgccttcatgtct
ttggcagctcgatttccacctaagtcaagcaatcaccaagctcatgacaaggttgtcaca
aacatattggttgaagaaccagaagttcaaatgaaaagtccagatgatgccaccaaatgg
catgaagaaatatcaagtcaaccaatctataaccaaatgtctatggcactcaatgaatct
gcagaaattcagagagacagtgagaccatagggacggaaaggaacttagtggaggcacat
agtcaatgtttggaggaagaatatgtatcatctcaagattctttcgaatcctcagtcaca
caaggcgctgtaggaatcagatcgtactcggtttccaactcggaagtagaagatcctatc
actgggtgccaatccaagaagattcatatgtccatttcaacaaatcaacagatggagaaa
gtgaccaagtttcaggacttgtaccatcaagtaaatggaagttcaatattatatgatgga
tccaagaatgggtatatagaatgcggacagctaaagacaagatcagacagaatcgatgat
ctcaatggcatttcttcgttcacaaatctactcaatctttacaatgaaacggttcaagta
ccggttgctccttccaagagcaatcagttgcacgcgtacccagattttggagaactagag
ccatggagatttgcaaatttcagtgaggaaatcatatcttcttggccttcaactgcttcc
aggttcaatgtcaaaaaagacgaaaagaacaaaagcagaaatgaagaactgtcaggaagt
gttgttaattcctctgtgcaacagaatattttgtggccttctcaagaaacgccaaagatg
gacccatatgcatcgttcagacagcagtcaacagaccagcaaaataattctcaaccaagg
tcaagcaatggatgcaatcaaccttcctactacagtcatcaatgtgaggggaaccaaaac
ttccagttagaaaaaacgtcagtcagagagcctgtaaaacatactgaaccacttctggga
aagaagagtggtagcatgcagcatgtccaaaatgtcaatgagctcaaaaaaaattcttgc
agtatcgttgatagtatctctgcagtgaataagcaaatacacatggaaaatcagtcagtt
gattcaaatttacaggagcaattatattcctatgggcagtcacataatgaggcaaataca
aatatttccaaaggaagaaaaggaagggctgggagtgataaaaagaatgcagttgactgg
gacacgttgagaaaacaggcacaggccaatggtaggaaaaaggaaagaaataaggaaaca
atggactcactggactacgaagcacttataagtgctaatgttaaagatatttctgatgca
atcaaggagcgagggatgaacaacatgctagctgagagaatccaggaatttctaaaccgg
ctggttagggaacatggaagcattgatctggaatggttaagagatgttcccccagataaa
gcaaaggattatctattaagtatacggggattgggcttgaaaagtgtggagtgtgtccgg
cttttaacgcttcaccaccttgctttcccggttgacacaaatgtcggaaggatagcagta
cgactgggatgggtccctctccaaccactacccgaatctcttcagttacacctcctagaa
atgtacccaatgctggagtcaattcaaaagtatctatggccaagattatgcaaacttgat
caactaaccctctatgagctgcactaccagatgattacatttggaaaggttttctgcaca
aagagtaaaccgaactgcaatgcatgtccaatgagaggagaatgcagacacttcgcaagt
gcttttgcaagtgcacgacttgccctgccagggccagaagagaagagcattgtgagttca
agtgtttcagttgaagccgagataaatcctactgtagctgtcactcccatgtcattgcct
ccacctgtttcaattgctgagataaatcctactatagctgtcactcccatgtcactgcct
ccacctgaaaacaactcactccagaaagcaagtactgaaactaacaagtgtgaaccaatc
attgaagaaccagcaacgccagaacaagagttcacagagctttcgcaaagtgacattgag
gacttattctacgaggatcctgacgagattcctaccatcaaactcaacatggaagagttc
acagcgactttacaaaattatatgcaagaaaatatggagctccaagaaggtgacatgtcc
aaggccttagtttccttgaatcgagaagccgcttctatccctacacccaagctaaagaat
gtcagtcgactccggacagagcaccaagtgtatgaactaccagattcacatccactcttg
gaagggatggacaaacgagagccagatgatcctagcccataccttcttgctatatggaca
ccaggtgaaactgcaaattcaattcaaccaccagaaagcaggtgtggctcccaagaccaa
aacaaaatgtgcaatgagaagacatgcttttcatgcaatagcataagggaagaaaatgct
caaacagtcagagggacaattttgataccttgtagaacagcaatgagagggagctttcca
ctcaatggcacatactttcaagttaatgagatgttcgcagatcatgattctagtcacagc
ccaattgatgttccaagggggtggatatggaatttgccaagacggactgtatactttgga
acttctgtatcaacaattttcaaaggtctatcgacagagggaattcaatactgcttttgg
agaggatatgtttgtgtgaggggatttgaccggaaaacaagagcaccacgacccttaatt
gccagattacactttcctgcaagtaggttgaccaagaccaaaaatgaggagaaaagataa
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