Prunus mume (Japanese apricot): 103340822
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Entry
103340822 CDS
T03196
Name
(RefSeq) putative ABC transporter B family member 8
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103340822
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmum02000
]
103340822
04147 Exosome [BR:
pmum04147
]
103340822
04090 CD molecules [BR:
pmum04090
]
103340822
Enzymes [BR:
pmum01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
103340822
Transporters [BR:
pmum02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
103340822
Exosome [BR:
pmum04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103340822
CD molecules [BR:
pmum04090
]
Proteins
103340822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
Zeta_toxin
AAA_22
ABC_ATPase
AAA_29
RsgA_GTPase
AAA_21
AAA_24
AAA_30
PRK
AAA_15
APS_kinase
Motif
Other DBs
NCBI-GeneID:
103340822
NCBI-ProteinID:
XP_008242496
LinkDB
All DBs
Position
LG8:14621812..14627733
Genome browser
AA seq
1257 aa
AA seq
DB search
MSKMGSPEKNEILAVKERGSDERSSHGSKGRNSVVKIFRYADWVDVVLMVLGTVGAVGDG
MSTNCLLVFVSRLMNNLGYGQSQQNNNHGINWMDEVEKCSLDFVYLGLAVMLVAFLEGYC
WSKTSERQVLKIRYKYLEAVLRQEVGFFDSQEATTSEVINTISKDTSLIQEVLSEKVPTF
VMHSSVFVSGLAFSTYLSWRLALVAFPTLLLLIIPGMIYGKYLMYLSKKSYKEYGKANSI
VEQALSSIKTVYAFTAERRIMERYSAILERTSRLGMKQGIAKGLAVGSTGLSFAIWGFLA
WYGSHLVMYKGESGGRIYAAGISFVLSGLSLGMALPDLRYFTEAAVAATRIFDRIDRRPL
IDGEDTQGLVLDNIRGELEFIGVKFTYPSRPDSVVLRDFNLKVEAGKTVALVGASGSGKS
TAIALVQRFYDADNGVVRIDGVDIRTLQLKWIRSKMGLVSQEHALFGTSIKENIMFGKLD
ANMDEVTAAAMAANAHNFIRQLPQGYETKIGERGALLSGGQKQRIAIARAIIKNPVILLL
DEATSALDSESETLVQNALDQASMGRTTLVVAHKLSTVRNADLIAVVSGGCIIEIGSHNQ
LINCQNGHYAKLAKLQRQFSCDNVDQEQISLSSVTRSSAGRLSTARSSPASTFAKSPLPL
EPSQPLSHPPTSFYRLLSLNSLEWKQGLIGSLSAIAFGSVQPVYALTIGGMISAFFVQSH
EEMRARIRTYSLIFSALSVISITLNLLQHYNFAYMGEQLTKRIRLQMLQKILTFETAWFD
EEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVTIAMIMGLVVAWKLALVMIAVQ
PLAILCFYTKKVLLSSLSANFIKAQNHSTQIAVEAVYNHRIVTSFGSVGKVLELFDEAQE
APRKEARKKSWLAGLGMGSAQCLTFMSWALDFWYGGTLVEKGQISAGDVFKTFFILVSTG
KVIAEAGSMTSDLAKGSTAVASVFEILDRHSLIPGSRNVGDEDGSSGNGIKLEKVTGSIE
LKKVDFAYPSRPDTLVLRQFSLEVKPGTSIGLVGKSGCGKSTVVGLIQRFYDAESGSVKV
DGVDIRELDVQWYRRHTALVSQEPVIYSGTIRDNIMFGKLDAPEDEVVKAARAANAHEFI
SSLKDGYNTECGERGVQLSGGQKQRIAIARAILRNPTILLLDEATSALDVQSEHLVQEAL
DRIMVGRTTVVIAHRPNTIKNLEMIAFVADGKVVEKGTYAQLKHKRGAFFNLATCQT
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaatgggatctcctgagaagaatgagatattggcagtgaaggagagaggatca
gatgaacgcagcagccatggaagtaaaggaagaaattctgtggtgaagattttcagatat
gctgattgggtggatgtggtgctgatggttttggggacagttggagcagtaggagatggg
atgtcgacaaattgcttgctggtgttcgttagccgtcttatgaataacttgggatatggt
cagagccaacagaacaataatcatgggatcaattggatggacgaggttgaaaagtgcagc
ttagactttgtctacttgggattagcagtaatgctggtggcttttttggaaggttattgt
tggagcaaaaccagtgagaggcaggtgctgaagattcgttacaagtacttggaagcagtt
ttgagacaagaagttgggtttttcgattcacaagaagccactacttcggaggtcatcaat
accatatcaaaagatacttcgctcatacaagaagttctaagtgaaaaggtgccaacattt
gttatgcactcatcagtgttcgtctcggggttggccttctccacatacttgtcatggaga
ctggccttggtagcatttccaacactacttctcctaataataccaggaatgatctatggg
aaatacctcatgtacttgtcgaaaaaatcatacaaggagtatgggaaagcaaacagcata
gtagagcaagctctaagctccataaaaactgtttatgcattcactgccgagaggagaatt
atggaaagatattcagcaatattggaaagaacaagtaggctggggatgaagcaaggcata
gcaaaaggtctggcagtgggaagcacagggctgtcttttgcgatatggggatttctggca
tggtatggaagccatttggtgatgtataaaggtgaaagcggtgggaggatttatgcggct
gggatctctttcgtattgagtggactatccctgggaatggcacttccggatttgaggtac
ttcacagaagctgcggttgctgctacacgaatatttgaccggatagaccgtaggcccttg
atcgacggtgaagacacccaaggacttgttttagacaacattagaggcgaactagaattc
attggtgtcaagttcacatacccttctcgtccagattccgtggtcctcagagatttcaat
ctgaaagttgaagcagggaagaccgtagctcttgttggtgcgagtggaagtggtaagtcc
acagcaattgcattggtgcaacgtttttacgatgcggataatggggttgttcggatcgac
ggtgtcgatataaggacacttcagctgaaatggattagatcgaaaatgggacttgttagt
caagaacatgctttgtttgggacgtcaattaaggagaacattatgtttggtaagcttgat
gccaatatggatgaagtcacagctgcagctatggctgccaatgctcataatttcataagg
caacttccacaagggtatgagaccaagattggagagagaggagcacttttgtccggtgga
caaaagcagcggatagctattgccagagcaattatcaagaaccctgtaattctactactt
gatgaagcaacaagcgctcttgactctgaatctgagactctggtccaaaatgctcttgat
caagcctccatggggagaaccaccttggttgttgcccacaagctttccacggttcgaaat
gcagacctaattgcggtggtcagtggcggttgcatcatcgaaataggctcacacaaccaa
ctcattaactgccaaaacggtcactatgcaaaactagcaaagctacagagacaattcagc
tgtgacaatgttgaccaagaacaaatttcattgtcttcggtcacaagaagcagtgctggc
aggctaagcacagcaagatcaagccctgcatcaacgtttgcaaaatcaccgcttcccctt
gagccctcacagcctttgtcacaccccccaacttccttctaccgccttctgtctttgaat
tcccttgaatggaagcaaggcctaattggaagcctctctgccatagcattcgggtcagtc
caacctgtctatgccttaaccataggaggcatgatatcagccttctttgtgcaaagccac
gaggaaatgcgtgctcgaattcgtacatattccttgattttctctgcactttctgtaatc
tccatcaccttgaatctcttgcaacactacaactttgcttacatgggtgagcagctcacg
aaaagaatccggttacaaatgcttcagaagatcttgacctttgaaacagcttggtttgat
gaggagcagaattcaagtggggcattgtgttcaagattgagcaatgaggcttccatggtt
aagtcccttgtggcagacagggtgtccttattagtccaaaccacttcagctgtcacaatt
gccatgatcatggggctagttgtggcttggaagctagcactcgttatgatcgcggtccaa
ccactcgcaatcctatgcttctacacaaagaaagttttgctgtctagcctatcagccaac
tttatcaaagcacaaaaccatagcactcaaattgcagttgaagcagtgtacaatcataga
attgtgacttcatttggaagtgtgggaaaagtacttgaattattcgatgaggctcaggag
gcgccgaggaaagaggcaaggaagaagtcatggctagctgggcttgggatggggtcagct
cagtgcctaacatttatgtcttgggcactggacttctggtatggtggtacactagtagaa
aaggggcaaatatcagctggggatgtgttcaaaacatttttcatattggtgagcactggt
aaggttatagctgaagctgggagtatgacttctgatttagccaagggttcaacagcagtt
gcatctgtgtttgagattctcgaccgccactcactaattccaggctctcgtaatgtgggg
gatgaagatggttccagtgggaatgggatcaagttagagaaagtaactgggagcatagaa
ctgaagaaggttgattttgcatacccaagtaggccagatacattggtgttgcgccaattt
agcttggaggtgaagccaggaacaagcattggacttgttgggaaaagtgggtgtggcaag
tcaactgtggttggattgatacaaagattttatgatgcagagagtgggtcagtgaaggtg
gatggtgtggacataagggagctagatgttcaatggtataggaggcacacagcccttgtt
agccaagagcccgtgatatactctggtaccattcgcgacaacatcatgtttgggaagctt
gatgccccagaggatgaagttgtaaaggccgccagagcagccaatgcccacgaatttatc
tcgtcattgaaggacggttataatacagagtgtggtgaaagaggggtgcagttatcagga
gggcaaaagcaaagaatagcaattgcaagagcaatacttagaaacccaacaatactattg
ctagatgaagcaacaagtgcacttgatgtgcaatctgagcaccttgtgcaagaagctttg
gaccgcattatggtgggaaggacaacagttgtgatagcacataggcctaacaccatcaaa
aaccttgaaatgatagcatttgttgcagatgggaaggtggtggagaaaggcacatatgct
cagctcaagcacaagcgtggtgccttctttaaccttgccacctgtcaaacttag
DBGET
integrated database retrieval system
