Prunus mume (Japanese apricot): 103343642
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Entry
103343642 CDS
T03196
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isoform X1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103343642
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmum01009
]
103343642
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmum03021
]
103343642
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103343642
03041 Spliceosome [BR:
pmum03041
]
103343642
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
103343642
Protein phosphatases and associated proteins [BR:
pmum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
103343642
Transcription machinery [BR:
pmum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103343642
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103343642
Spliceosome [BR:
pmum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
103343642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
103343642
NCBI-ProteinID:
XP_008245513
LinkDB
All DBs
Position
LG1:23143378..23155475
Genome browser
AA seq
327 aa
AA seq
DB search
MMMMTMEGMMDKGVLDDIIRRLLEGKGGKQVQLSEAEIRQLCVNARQIFLSQPNLLEVRA
PVRICGDIHGQYQDLLRLFEYGGYPPSATYLFLGDYVDRGKQSLETICLLLAYKIRYPDK
IFLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTECFNCLPVAALIDEKILCMHGGLS
PELENLDQIKELQRPTDIPDNGLLCDLLWSDPDARIEGWAESDRGVSCTFGADKVIEFLD
KNELDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDEGLVCSFEILK
PVDNKASPSGSNSSKLNLKKLPKTGKN
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgacaatggaggggatgatggataagggtgtattggatgatataataagg
aggctattggaaggcaaaggaggaaaacaagtgcagctatcagaggcagagatccgtcaa
ctttgcgtcaacgcccgccaaatcttcctttctcagcctaatcttcttgaggtgcgagct
ccggttcgcatatgtggtgatatacatggacaataccaagacctgctaaggctatttgaa
tatggtggttaccctccttctgcaacctacctgtttcttggagattatgtggatcgaggc
aagcaaagtttggagacaatatgtttgcttctggcctataaaataagatatcctgacaaa
atctttcttttgagaggaaaccatgaagatgcaaagattaatcgaatatacgggttctat
gatgagtgtaaaaggaggtttaatgttaggctttggaaaatatttactgagtgctttaat
tgtttgcctgtcgctgcacttattgatgagaagatactttgtatgcatggggggctgtca
ccagagttggaaaatttggatcaaataaaggaacttcaaaggccaactgacattccagat
aatggtcttttatgcgatctgctttggtctgatcctgatgctaggattgagggctgggca
gagagtgatcgaggtgtttcctgcacttttggagctgataaagttattgagtttttagat
aagaatgaacttgatctcatttgccggggtcatcaggtggtggaggacggctatgagttt
tttgcaaaacgaagattagtcactatattttcagctccaaactatggcggggagttcgat
aacgctggtgctctattgagtgttgacgaaggtctagtgtgttcctttgagatattaaaa
ccagtggataataaagcatccccaagtggttctaattcatccaagttaaatcttaaaaag
cttcctaaaactggaaagaactga
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integrated database retrieval system