Prunus mume (Japanese apricot): 103343818
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Entry
103343818 CDS
T03196
Name
(RefSeq) exopolygalacturonase clone GBGA483-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00040
Pentose and glucuronate interconversions
pmum01100
Metabolic pathways
Module
pmum_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103343818
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
103343818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
103343818
NCBI-ProteinID:
XP_008245681
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MGSKFILGTTFFLFLISFSIKARAADFDIKKYGAKADGKTDDSQAINRAWKEACASTTPS
TVLIAKGNYMAGPVKFQGPCKAPVSIRVEGTLQAPAEPEKLKSQDGWVVFRNIDGLTVSG
GGTFDGQGSIAWSKNDCAKTGKCNSLPINIRFSGLTNSHIQNITSSNSKLFHINVLNCKN
VTLQHVIITAPGESLNTDGIHIGRSSNINITGAEIKTGDDCISLGDGSQQINIEKVKCGP
GHGISIGSLGRYHDEQPVTGVTVRNCTISNTSNGVRVKTWPASPNGVASDLHFEDIIMEN
VKTSPVLIDQEYCPNGQCQAKIPSKVKISNVSFKNIRGTSADPVVVKLACSKGIPCQNVQ
ISDIHLTYNGKNGAATSVCTNVKPTMTGQIFPPACAKTAALR
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaaaatttattcttggaactacattctttttgttcttgatatcattttccata
aaagccagagctgcagattttgatatcaagaagtatggagccaaggctgatggcaagaca
gatgatagccaggctattaatagggcttggaaagaagcatgcgcatccacaactccgagc
acggttctgatagcaaaaggaaactacatggctggtccagtgaagtttcaagggccctgc
aaagcaccggttagcattcgggttgaaggaaccctgcaggctccggcagagccagaaaag
ctcaagtcacaagatggctgggttgttttccgaaatattgatgggttaacagtctcagga
ggtggcacttttgatggccaaggatcaatagcttggtccaaaaatgattgtgccaaaact
ggaaagtgcaactcactgcctataaacataagattttcagggcttaccaattcacacatt
caaaacataacatcttcgaacagcaagctgttccacataaatgtcttgaactgcaaaaac
gtgacacttcaacatgtgatcatcactgcccctggtgaaagcctaaacacagatggaatc
cacattggccggtcatcgaacattaacatcaccggcgcagagatcaaaactggcgatgat
tgcatctctcttggtgatggaagccagcaaataaacattgaaaaggtgaagtgcgggccg
ggccatggcatcagcattgggagcctaggcaggtaccatgatgaacaacctgtcacagga
gtcacagtgagaaactgcaccatatcaaacacttcaaatggcgtgagggtcaagacatgg
ccagcttctccaaatggtgtggcctcagatttgcactttgaggacataattatggaaaat
gtgaagacctcccctgttcttatagaccaagaatactgtccaaatggccaatgccaagcg
aaaatcccgtcaaaagttaagatcagcaatgtgagcttcaagaacattaggggcacttct
gctgatcctgttgttgtgaagcttgcttgcagcaaaggcattccttgccagaatgtgcaa
attagtgacatccatttgacatacaacgggaaaaatggtgctgccacatctgtatgtact
aacgtcaagcccactatgactggccaaatttttccacctgcttgtgcaaagactgcagct
ttaaggtga
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