Prunus mume (Japanese apricot): 103343963
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Entry
103343963 CDS
T03196
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00040
Pentose and glucuronate interconversions
pmum01100
Metabolic pathways
Module
pmum_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103343963
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
103343963
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
NosD
Motif
Other DBs
NCBI-GeneID:
103343963
NCBI-ProteinID:
XP_008245812
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MAMKLSFLAMLLCLLLASTPKAHASVFDVTSATYGAKPGSDVSTALAKAWSDACASPSAS
KVVVPSGTYNLKEANFRGPCKAPIEMQVQGTLQAPADAGQLTRPDTWVGFQYIDMLTLSG
GGTFDGQGALSWNQNDCHKNKNCKPIPVNLRFEFLTNSKVQDITSLNSKFFHMHVFRCNH
TTFQQLTITAPDDSRNTDGIHIGASTGINITHAKIGTGDDCISIGDDSHEITVTDVTCGP
GHGISIGSLGKYKDEKDVTGIIVKNCTLTNTDNGVRIKTFPDSPSPSTASGIHYEDIIMV
NVSNPILVDQLYCPYTQCEQKPPSKVKISNVSFKNIKGSSFTPLAVKLVCTTGIPCENVE
LIDIDLTYGGDKGPLTSMCSNVKPTIAGVTKALGCATSSLAPLPLSKK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggctatgaaattaagtttcttggcaatgcttttgtgcttattgttagcatctacacct
aaagctcatgctagtgtgtttgacgtgacgagtgcaacatacggtgcaaagcctggctct
gatgtcagtacggccttggccaaggcttggagtgatgcatgtgcatcgccatccgcgagt
aaagttgttgttccgagcgggacatacaacttaaaagaagcaaatttcagaggcccctgt
aaggctcctattgagatgcaagttcaaggcacattgcaggctccagcagacgctggccaa
ctcacaagaccggatacttgggttggttttcagtacattgacatgctcaccttatcaggt
ggtgggacttttgatggccaaggagcactttcttggaatcaaaatgactgccacaaaaac
aaaaattgcaaacctattcccgttaatctgcggttcgaattcctcacaaattccaaagtt
caggacataacttcacttaacagcaaatttttccacatgcatgttttccgatgcaaccat
actacatttcaacagcttaccatcacagcacctgacgacagtagaaacacagatggaatc
catatcggggcttcgactggtatcaacattactcatgcaaagattggaactggggatgac
tgtatttctattggtgatgactcccacgaaatcacagtgactgatgttacttgtgggcca
ggccatggaataagcattggaagccttggaaaatataaggacgaaaaggatgtgaccggg
atcatagttaagaactgcaccctgactaatacggacaacggtgtgagaatcaaaacattt
ccagattctccttcgcctagcactgcctcgggtatacactatgaggatattatcatggtt
aatgtcagtaaccctatcctcgtagaccaattgtactgcccatatactcagtgtgaacaa
aagcctccgtcaaaagttaagataagcaatgtcagcttcaagaacattaagggctcatct
ttcactccacttgcagtcaagcttgtatgtaccacgggcataccgtgtgagaatgtggag
ttgattgacattgatctcacctacggcggagacaaaggccctcttacctctatgtgttct
aatgtcaagcccacaattgctggcgtgacaaaggctcttggttgtgctacatcgtccttg
gcacctcttcctttatccaagaagtag
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