Pedobacter mucosus: LOK61_04390
Help
Entry
LOK61_04390 CDS
T08291
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pmuo
Pedobacter mucosus
Pathway
pmuo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pmuo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LOK61_04390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmuo03021
]
LOK61_04390
Transcription machinery [BR:
pmuo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LOK61_04390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_24
HTH_11
GerE
UPF0122
HTH_AsnC-type
Phage_antitermQ
HTH_23
HTH_10
HTH_Tnp_ISL3
HTH_DeoR
HTH_20
MarR_2
CENP-B_N
MarR
Motif
Other DBs
NCBI-ProteinID:
UKT65018
LinkDB
All DBs
Position
complement(1045456..1046025)
Genome browser
AA seq
189 aa
AA seq
DB search
MSTYRELTDVSLLDLLRKGDRLAYTQVYDRYERLLFMHAYSRLQKKEESRDIVQDIFIVL
WNNREKLEITGSFRAYLFTAVRNRIFTLIAKEKLQSEYLSSLENYIKSWNDDTDHNIRYA
QLTDIIDQEIARLPNKMREVFELSRHEEMSHREIAEKLEISEQTVKKQVQNALKILKNRL
GSAFPLLFL
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacctaccgcgaacttactgatgtcagtcttctcgatcttctaagaaaaggcgac
cgccttgcctatacgcaggtttatgaccgttacgaacgcctgctctttatgcatgcctat
tcgcggttacaaaaaaaggaggagtcaagggacatcgttcaggatatttttatcgtcctt
tggaacaacagggagaaacttgagattaccggcagtttcagggcttatctttttacagca
gttagaaaccggatttttacccttatagccaaagaaaaacttcagtccgaatacctatcc
tcactggaaaattatatcaagagctggaatgatgataccgaccataatattcgctatgcg
cagctgacggacattatagaccaggaaatcgcccggctgccaaataagatgcgggaagtt
ttcgagcttagcagacatgaggaaatgagccaccgtgaaattgcggaaaaacttgaaatt
tctgagcagacggtaaaaaaacaggttcaaaacgcattaaagattctaaaaaacaggctg
ggttctgcctttcctttactttttctgtaa
DBGET
integrated database retrieval system
