Pedobacter mucosus: LOK61_16140
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Entry
LOK61_16140 CDS
T08291
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pmuo
Pedobacter mucosus
Pathway
pmuo00521
Streptomycin biosynthesis
pmuo00523
Polyketide sugar unit biosynthesis
pmuo00541
O-Antigen nucleotide sugar biosynthesis
pmuo01100
Metabolic pathways
pmuo01110
Biosynthesis of secondary metabolites
pmuo01250
Biosynthesis of nucleotide sugars
Module
pmuo_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmuo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LOK61_16140 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LOK61_16140 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LOK61_16140 (rfbC)
Enzymes [BR:
pmuo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LOK61_16140 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UKT63288
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Position
complement(3885573..3886112)
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AA seq
179 aa
AA seq
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MEIEQTGLKDCVIIKPRIFQDPRGYFFESFNKNTFEEKTGLSGNFVQDNQSFSSYGVIRG
LHAQSGEFAQAKLVRVLKGEVLDVAVDARPSSPTYGKHFAIKLSAENNFQLYVPRGFLHG
FSVLSETAEFFYKCDNFYNKGAEQGVIFNDPELNIDWLIPEYKQAISDKDLILNSFSSL
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgagcaaacgggattaaaagattgtgtaattattaaaccgaggatttttcag
gatcccaggggatattttttcgaaagctttaacaaaaatacatttgaagaaaaaacaggc
ttatcaggcaattttgttcaggataaccaatccttttcttcttatggtgtaattaggggt
ttacatgctcaaagtggtgaatttgcacaagcgaaattggttcgtgtattaaaaggagag
gttttagatgttgctgtagatgcccgtccgagttcgccaacctacggaaaacactttgcc
ataaagttaagtgcagaaaataattttcagctttatgtgcctagaggatttcttcacgga
ttttctgtattaagcgaaactgcagaattcttttataaatgtgataatttctacaataaa
ggagcagagcagggtgttatttttaacgaccctgaattaaatatcgattggttaattcct
gaatacaaacaagcgatttctgataaggatcttattttaaattcattttcttctttataa
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