Protobothrops mucrosquamatus (Taiwan habu): 107284305
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Entry
107284305 CDS
T05763
Symbol
LIG4
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
107284305 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmur03400
]
107284305 (LIG4)
Enzymes [BR:
pmur01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
107284305 (LIG4)
DNA repair and recombination proteins [BR:
pmur03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
107284305 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
BRCT_2
DNA_ligase_IV
DNA_ligase_A_C
RNA_ligase
LIG3_BRCT
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
107284305
NCBI-ProteinID:
XP_015667828
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MRREKTSKMASVPISHSSSKLTVASQVPFADLCSTLEQIQKCKSRSDKTRYFKDFLDSWR
KFHDALHKNEKDVIDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDAL
KLLNFRTPIGSQGNVGDFAMIAYFVLKSRCINQGQLTIQQVNDLLDSVSNNNAAKRKGLV
KKSLLQLITQSSALEQKWLIRMIIKDLKLGVSQQTLFSIFHSDAAELHSVTTDLEKVCRQ
LHNPLVSLIDASITLFSAFKPMLASIASVHQIEKQMNNQTFYIETKLDGERMQMHKDGDV
YKYFSRNGYDYTQQFGASPLEGSLTPFIHQAFRNTQNCILDGEMMAYNPTTQTFMQKGSK
FDIKRMVDDSELQTCFCVFDVLMVNDQKLGHEMLNKRCNRLNTVFIPIPGRIQIVSRIQA
NTQKEVVDALNEAIDNREEGIVIKDPISIYKPDKRGEGWLKIKPEYVSGLMDELDLLIIG
GYWGKGLRGGMISHFLCAVAEAPLPGERPSKFHSICRVGSGCTMRELYDLGLKLATYWKK
YDRKVPPCNILCGAEKPQVFIDPCNSVIVQIKAAEIVSSDMYKTECTLRFPRIERIRDDK
EWYECMTVDFLEQLRSKAAGKLATKHLDIVEDEPQEKKRKTVAKIKKAIGLMDHFKAPDL
SKINKVSNVFENVEFCIMTGTQHYSKYALESKVAEYGGSIVQNPGPDTYCVVAGTENVRV
KNIISSNNYDVVRAEWLLQCFQAGKFVPWQPTFMIHMSPETKQHFACEYDTYGDSFTADT
NPLELKAVFSRINTSEEIFQDVIANIEARYSWESSLSMFRQQTIYLSLSDEISYLRDRIN
QTRCLTVELILRFHGAKVVSQLEEGVSHVISGDHSDLKKIKTIRRTFKKKFKIVSEQWIK
DSVKAGELQNENLYMM
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgaggagagaaaaaacatctaagatggcttcagtccccatttcacattcatcttccaag
ctaactgtagcatcacaagtcccatttgcagatctctgttcaacattagaacaaatacag
aagtgcaaatcccgatcagataaaacaagatatttcaaggattttctagattcctggagg
aaatttcatgatgctcttcataaaaatgagaaggatgtaatagattctttttatcctgca
atgaggcttattcttccacagttggaaagagagaggatggcttatggaattaaagaaaca
atgcttgctaagctatatattgaattgctaaatttacccaaagatggaaaagacgcttta
aaacttttaaattttcgaacacccattggctcacaaggaaatgttggagactttgctatg
attgcctactttgttttgaaatcaagatgcatcaaccaaggtcaactgaccatacaacaa
gtgaatgatcttctagattcagtttctaataataatgctgccaaaaggaagggtctagtt
aagaagagccttcttcagttaataactcagagctcagcactagaacagaagtggttgatt
aggatgatcataaaggatttgaaacttggtgtcagccagcaaaccttattttctattttc
cattctgatgctgcagaattgcacagtgtcacaacagatttggaaaaggtttgtaggcag
ctgcataatcctttagtatcacttattgatgcttctattacattattttctgcctttaaa
ccaatgcttgcttctattgccagtgtgcaccaaattgagaaacaaatgaataatcagact
ttttatatagaaaccaaattagatggtgaacgaatgcagatgcacaaagatggagatgtt
tacaaatacttttccagaaacgggtatgattatactcagcagtttggtgcttctcccctt
gaaggttcattgactcctttcattcatcaggcctttagaaatactcaaaactgcattctg
gatggtgaaatgatggcctataatcctaccacccagacttttatgcagaaaggaagcaag
tttgacatcaaaaggatggtggatgattctgaattacaaacatgcttctgtgtatttgat
gttcttatggtcaatgatcaaaagttgggtcatgaaatgctgaacaaaaggtgcaatagg
ttaaatacagtttttataccaatacctggtcgaatacagattgtttctagaattcaagca
aacacacagaaagaagtagtagatgccctgaatgaagccattgataacagagaagaagga
attgtaataaaggaccccatatcaatttacaagccagataagcgtggggaaggatggctg
aagatcaagccagaatatgtcagtgggttgatggacgaactggatcttttaattattgga
ggctactggggcaaaggtcttcgtggtggcatgatatctcattttttatgtgcagttgct
gaggctcctttgcccggtgaaagaccatctaaattccattccatttgccgtgttggttcc
ggttgcaccatgagagaattgtatgatcttggcttgaaattagccacatattggaaaaaa
tacgataggaaggttcccccttgtaatatcttatgtggtgctgagaagcctcaagtcttt
attgatccttgtaattcagtgattgtccagattaaagctgctgagattgtgagtagtgat
atgtataaaacagaatgcacattacgctttccacgcattgaaagaataagggacgataaa
gaatggtatgaatgtatgactgttgactttctagaacaactcagaagtaaagctgctggg
aagcttgcaacaaaacaccttgatatagttgaggatgaaccacaagaaaagaagcgtaaa
actgttgcaaaaattaaaaaagcaatcggtttaatggatcattttaaagcacctgacctt
tctaaaataaacaaagtttctaatgtttttgaaaatgttgagttttgtattatgactggg
acacaacattattcaaagtatgctctggaaagcaaagtagcagaatatggtggcagcata
gttcaaaatcctgggcctgatacttattgtgttgtggcagggactgagaatgttagagtg
aaaaatattatttcttccaataattatgatgttgtgagagcagaatggcttttacagtgt
ttccaagctggaaaatttgtaccatggcagcctacttttatgattcacatgtctcctgaa
acaaagcaacattttgcttgtgaatatgatacttatggtgatagtttcacagctgatact
aatccattagagttgaaggcagtgttctcaagaattaatacctctgaagagatttttcag
gatgtgattgctaacatagaagcccgttattcttgggaaagttccttaagtatgttcagg
caacaaaccatttacctgagcctttctgatgaaataagctatttaagagacaggataaat
caaaccagatgtttaaccgtagagttgatacttcgctttcatggagcaaaagtagtgtca
cagcttgaggaaggtgtatcccatgtaatcagcggagatcattctgatttgaagaaaata
aaaaccattagaaggacatttaagaaaaagtttaaaattgtgtcggagcaatggataaaa
gattctgtaaaagctggagaattacaaaatgaaaacttgtacatgatgtaa
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