Protobothrops mucrosquamatus (Taiwan habu): 107285296
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Entry
107285296 CDS
T05763
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03013
Nucleocytoplasmic transport
pmur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107285296 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
107285296 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmur03019
]
107285296 (THOC1)
03041 Spliceosome [BR:
pmur03041
]
107285296 (THOC1)
Messenger RNA biogenesis [BR:
pmur03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
107285296 (THOC1)
Spliceosome [BR:
pmur03041
]
Complex C
Other components
EJC/TREX
107285296 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107285296 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
107285296
NCBI-ProteinID:
XP_015668957
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MSPPTLFSLPEARLRFMNSTRDALKNKTIKPLLNAFSQIPGSENEKKLTLDQAFRVALEE
EIINKTSCENVLAIISLVINGVIEGICTASTPFVLLGDVLDCLPLDQCDKIFTFVEKNVT
TWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQF
NLENITVFNTSEQDSTLGQKHAEEREEGMEVEEGEMGDDEAPTSCSIPIDYNLYRKFWSL
QDYFRNPVQCYEKVSWKTFLKYSEEVLTVFESCKLDDTQASRKKLEELKTGGEHVYFAKF
LTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYILTDEQSLWIEATTKLVY
KLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERPSDSKPVRPFVRKRPAPE
DFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSESREYMPTLEEFFEEAIEQADPENMV
DKEFKVVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENNESPDVQRDKLVTGEQIELFANRLGEYWKILAPYLEMKDSDI
RQIELDSEDLKMRAKQLLVTWQDQEGIHATMENLIIALNKAGLNDISESLTNDSENNS
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgccgacgctctttagcttgccggaggcgcggttgcgtttcatgaactctact
cgagatgcactcaaaaacaaaaccattaagcctttattgaacgcattcagtcagatacct
ggaagtgaaaatgaaaaaaagttaacactggaccaagcattccgagttgctctggaagaa
gaaattataaataaaacttcttgtgaaaatgtcctggctatcatttcacttgttattaat
ggggtcatagaaggtatttgtacagcatcaaccccttttgtgctcttgggagatgttttg
gattgccttcctttggatcagtgtgacaaaattttcacctttgtggaaaaaaatgttact
acgtggaaatcgaacacattttactctgcgggaaagaattatttactaagaatgtgcaat
gatcttttaagaagactgtcaaaatcacaaaatacagtgttttgtggaagaattcagctc
ttcttggccaggttatttcctctttcagaaaagtcagggcttaacttgcaaagtcaattt
aatttggaaaatatcacagtttttaataccagtgaacaagacagcacccttggacagaag
catgcagaggagagagaggaaggaatggaagtagaagaaggtgaaatgggagatgatgaa
gctcctacaagttgttccattccaatagattataatctgtacagaaaattttggtcactt
caagattacttcagaaatcctgtgcagtgctatgaaaaggtctcatggaaaacatttctt
aagtactcggaagaagtattaactgtctttgagagctgcaagttggatgacactcaggca
tcaagaaaaaaattggaagagctgaaaactggaggagagcatgtttattttgcaaaattt
cttacaagtgaaaagttaatggatttacagttgagtgacagcaattttcgccgccatatc
ctattgcagtatttaatattatttcagtacttaaaaggacaggtaaagtttaaaagttca
aactatattctgactgatgaacagtccctgtggattgaagctaccacaaaactagtttac
aagcttctatcagaaaacccacctgatggagaaagattctccaaaatggtagagcatata
ttaaacacagaagaaaattggaattcatggaaaaatgagggctgtccaagctttgtgaaa
gaaagaccgagtgattccaagccagtgagaccttttgtgcgaaagagaccagctcctgaa
gattttctagggaaaggacctaacaaaaaaattctaatgggaaatgaagaattaactcgc
ctctggaatttatgccctgataacatggaagcgtgtaaatctgagagtcgagaatatatg
ccaacattggaagagttttttgaagaagctatagaacaagcagatcctgaaaacatggtt
gataaagaatttaaggttgtgaataattctaactacggctggagagcattaagattattg
gcaagaagaagtcctcacttttttcagccaaccaatcaacagtttaaaagtttaccggaa
taccttgaaaacatggtcattaaattagcaaaagaattacctcctccttctgaagaaatt
aaaacaggcgaggatgaagatgaggaagataatgatgctttattaaaagaaaacaatgaa
agtccagatgttcaacgggacaagcttgtaacaggagaacaaatagaattatttgctaac
agactcggtgaatattggaaaatcctggctccatacttggaaatgaaagactctgatata
aggcagattgaattagatagtgaagatctgaagatgagagctaagcagttgcttgttacc
tggcaggatcaagaaggaatccacgctactatggaaaatttgattattgcattgaacaaa
gctgggctgaatgacatttctgaaagcttaaccaatgacagtgaaaacaatagctaa
DBGET
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