Protobothrops mucrosquamatus (Taiwan habu): 107287916
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Entry
107287916 CDS
T05763
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03013
Nucleocytoplasmic transport
pmur03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107287916 (UPF3A)
03015 mRNA surveillance pathway
107287916 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmur03019
]
107287916 (UPF3A)
Messenger RNA biogenesis [BR:
pmur03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
107287916 (UPF3A)
mRNA cycle factors
P-body specific factors
107287916 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
107287916
NCBI-ProteinID:
XP_015671960
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MEAPLQRESPRRVSETPSSSPGPPPPPPPPSNLALPPGKQQREEKRATLSKVVIRRLPPN
FTKEQLEEQLHPLPAHDYFEFCSSDPSLFPHLYSRAYINFRNPDDILLFRDRFDGYVFID
NKGLEYPAVVEFAPFQKISKKKLKKKDAKSGSIEDDPEYRKFLESYCAEEEKICANPETL
LGEIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRRESEKKRLREDEKRKRR
EEERRKRKEAEKQKKIAEKEIRIKLLKKPEKGDEQITEKHREKEKCDIEDNKWEKSPGHG
SLKSKPLEVSLKELKEKSQNDSDKEQRDSERRFREKEPERQRYRLEDGRKHRTHYEFDKY
VRRNEDEPKWEKGYSQDRGKKVNYNYSFTVDTVDKLGKEDKCDDMASKKERIRNKDRPAM
QLYQPGIRIRTHMGPTSRFYDCAETISQEVCDRRYEADNSAGGGSEKSEDAE
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgccacttcagcgagaatccccgcgtcgtgtgtcagagacgccgtcctcctcc
cctgggcccccgccgcccccgccgccgccctccaacctggcgctgccgccgggcaagcaa
caacgggaagagaaaagagcgacgctgagcaaagtagttatacgccggcttccccctaac
tttactaaagagcagctagaagaacaactccatccacttccggctcatgattattttgaa
ttttgttcctctgatcccagtcttttcccccacctctactcaagagcatatattaatttt
agaaatcccgatgacatccttctttttagagatcgctttgatggctatgtcttcattgac
aataaaggtttggaatatcctgctgttgttgaatttgcaccattccaaaagatttctaaa
aagaaactaaagaagaaagatgcaaaatctggaagcatagaagatgatccagaatataga
aaatttttagaaagttattgcgctgaagaagaaaaaatatgtgccaaccctgaaacgctt
ctgggagaaattgaggcaaaaacaagagaactcattgctagaagaaccaccccacttttg
gaatatattaaaaatagaaaattagaaaaacagagaattcgagaagagaaaagggaagaa
agaaggagaagagaatcagaaaaaaaacggctaagagaagatgagaaacggaaacgcaga
gaggaagaaagacgcaaaagaaaagaagctgagaaacaaaagaaaattgctgaaaaagaa
ataagaatcaagcttcttaagaaacctgaaaagggggatgaacagattacagaaaagcac
agagaaaaagaaaaatgtgatattgaagacaacaaatgggagaaatcaccaggacatggg
agtttaaaatccaagccactggaagtttctctaaaggaacttaaggaaaaatcacaaaat
gatagtgataaagaacaaagagattcagagagaagatttcgtgaaaaagaacctgagaga
caaaggtatcggttggaagatggccgaaagcacagaactcactatgaatttgacaaatat
gtgagacggaacgaagatgagccgaagtgggagaaagggtacagccaagaccgaggaaag
aaagtgaactacaactacagcttcactgtggacacagtagacaaactgggtaaagaggac
aagtgtgatgacatggcatccaaaaaggagcgcataagaaataaggatcgcccagccatg
cagctgtaccaaccaggaattcgcattcgaacacatatgggacctacaagtaggttctat
gactgtgctgaaacaatttctcaagaagtttgtgacagaaggtatgaggcagacaactca
gctggtggtggttctgagaagagtgaagatgcagaataa
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