Persephonella marina: PERMA_0069
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Entry
PERMA_0069 CDS
T00870
Name
(GenBank) conserved hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
pmx
Persephonella marina
Pathway
pmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PERMA_0069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmx03019
]
PERMA_0069
Messenger RNA biogenesis [BR:
pmx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PERMA_0069
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
BTBD16_C
Motif
Other DBs
NCBI-ProteinID:
ACO03636
UniProt:
C0QT52
LinkDB
All DBs
Position
complement(63893..65554)
Genome browser
AA seq
553 aa
AA seq
DB search
MVEIVVGISALAVGTAAGFAACKATVGKTLKEKERKAEEIIKNKEEIEREARRKAEEIIK
EFEAEAKRKAEEIVREAESLKQQQEIIIEKEILKRKQELEKELKSEREELQNLEKTLMSR
EAQLEKRLARLEHREEELDKKWDEIKKLEEEIRSIQKEIEEKEAKLKAAEEQYMLELQRI
ASMTKEEAREELLRKVEEEAKLEAAKLMKEIEEEARKEAEKEAKWNLVTAIQRLAPEITT
SHTISVVDLPSNDLKGRIIGREGRNIRAFEMETGVDLIIDDTPDIVTISSFDPLRREIAK
RSLERLIADGRIHPGRIEEIVTKVKDEMESHIRKLGEETCLELGFTDVHPELFYYIGKLY
YRTSYTQNVLLHTKEVAHLAGIMAAELGLDEKAAKRGGLMHDVGKSISHEVGGSHSKVGA
ELAKRYGEPDVVINAILYHHNDEPARYPEAVLVAAADALSAARPGARREALQSYINRLEK
IEAIVNSFENVEKSFAIQAGREVRIIVNAEKLSDEEAYMLTKEIAKRIEKEVEFPGQIKI
TTIRESRFIEVAK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggtagagatagttgttggtatatcagctttagctgttggaacggcagcgggatttgct
gcgtgtaaagcaactgttggaaaaacactcaaagagaaggaaagaaaagctgaagagata
ataaaaaataaggaggagatagagagggaagcaagaagaaaggctgaagagataataaag
gagtttgaggctgaggcaaagagaaaggctgaggagatagtgagggaggctgaaagtctc
aaacagcagcaggagataataatagagaaagagatactgaagagaaaacaggagcttgaa
aaagagcttaaatctgagagggaagagctgcagaaccttgaaaaaacactgatgagcaga
gaggctcagcttgagaaaaggcttgcaagacttgaacacagggaagaggaacttgataaa
aaatgggatgagatcaaaaagcttgaagaggagataagatcaatacagaaagagattgag
gagaaagaggcaaaactaaaagctgcagaagaacagtacatgttagagctccagagaata
gcgtctatgacaaaggaagaggcaagagaggagcttttaagaaaggttgaagaggaagct
aaacttgaagcagcaaaacttatgaaggagattgaagaagaggcaagaaaagaggcagag
aaggaggctaaatggaatcttgttacagctatacagagacttgctccagagataacaaca
tctcacacaatatccgtagttgatctcccaagtaacgatctcaaaggaaggattatagga
agggaaggtagaaatataagagcctttgagatggaaacaggggttgatcttataatagac
gacactccagacatagtaacaatatcctcatttgatccattaagaagggagatagcaaaa
agatcccttgagagacttatagcggacggaagaatacatccaggaaggattgaggagatc
gttactaaagtaaaggatgagatggaatcacacataagaaagcttggtgaggagacatgt
cttgagcttggatttacagatgttcaccctgaacttttctactacataggaaagctttac
tacagaacatcctatacacagaacgttcttctccacacaaaagaggttgcacaccttgca
ggtataatggctgctgagcttggtttagatgagaaggctgccaagagaggtggtcttatg
catgatgttggaaaatcaatctcacatgaggttggtggatcacactcaaaggtaggtgct
gaacttgctaaaagatacggtgagcctgatgttgttataaacgctatcctttatcaccac
aatgacgaacctgcaagatatcctgaggctgttctggttgcagctgctgacgcactttca
gcagcaagacctggagcaagaagggaagctctccagtcttatataaacagacttgagaag
attgaggctatagttaactcgtttgagaatgttgaaaaatcattcgctatacaggcagga
agggaagtaagaataatagttaacgccgaaaagctctcagatgaagaggcttacatgctc
acaaaggagatagcaaagagaatagaaaaagaggttgagttcccgggtcagataaagata
acaacaataagagaatcaagatttattgaggttgcaaaatag
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