Persephonella marina: PERMA_1596
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Entry
PERMA_1596 CDS
T00870
Name
(GenBank) RNA pseudouridine synthase family protein
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pmx
Persephonella marina
Brite
KEGG Orthology (KO) [BR:
pmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmx03009
]
PERMA_1596
Enzymes [BR:
pmx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
PERMA_1596
Ribosome biogenesis [BR:
pmx03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
PERMA_1596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF3912
Motif
Other DBs
NCBI-ProteinID:
ACO04038
UniProt:
C0QRR7
LinkDB
All DBs
Position
complement(1545609..1546151)
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AA seq
180 aa
AA seq
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MFNKPSGYITAVKDERYPTVMDFFADLPFSKKLFPVGRLDIDTEGLLIITDDGQLAHRIA
HPKWEIEKEYYAVVKGDISDLDLSRFEKEGIVLKKEKYRTKPFKINIISTSEERSEIYIT
VREGKYHIVKRIMEELGHPVLYLKRVRIGPLRLDEDLEEGDFRELTDEEIEKLKRSVNLL
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaaccttcaggttatataacagctgttaaagatgagagatacccgactgtt
atggatttttttgctgatctcccattcagtaaaaaacttttccctgtaggaaggttagat
attgatacagaaggccttttaataataacagatgacggtcagcttgcacacagaatagcc
catccaaaatgggagattgagaaggagtactacgcagtagttaaaggggacatatcagat
cttgatctttcaagatttgagaaggaaggtatagtcctaaaaaaggaaaagtacagaaca
aaacccttcaaaataaatatcatatcaacctcagaggaaagatcagagatatatataaca
gtacgtgaaggtaaataccatatcgtaaaaaggataatggaagagcttggtcatcctgtt
ctttatcttaaaagggtgagaattggacctttacgtctggatgaggatcttgaggaaggt
gattttagagaactgacagatgaggagatagaaaaactaaaaagatcagtaaatctgcta
tga
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