Pseudomonas mendocina ymp: Pmen_0417
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Entry
Pmen_0417 CDS
T00510
Name
(GenBank) transcriptional regulator, IclR family
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
pmy
Pseudomonas mendocina ymp
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmy03000
]
Pmen_0417
Transcription factors [BR:
pmy03000
]
Prokaryotic type
Helix-turn-helix
IclR family
Pmen_0417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR
HTH_IclR
MarR_2
HTH_5
Fe_dep_repress
HTH_20
TrmB
HTH_24
HTH_11
HTH_Crp_2
Rrf2
MarR
HTH_6
TBPIP
Motif
Other DBs
NCBI-ProteinID:
ABP83190
UniProt:
A4XPC4
LinkDB
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Position
440708..441466
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AA seq
252 aa
AA seq
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MSENKKEKGSSITRVLEIIEMLSQAQRPMAPADIAHYLDIPKPSIHRLLQQLEADGFLQV
DLRGLWGPGAKLHGLAWAVLRNQRFKNERMAILHELAGKIGETCGISIPHGLDMVYADRV
HANWPLQIHLPEGSQVPIWCTASGKLYLSSFPRAQRDRIISKLPLTRMTCNTLCTLDALK
AELDRTCERGMGVDNEEFVDGMVACSVPVADDEGVLLACLFVHAPVIRVSAEQLMAFKPL
LTDAAAELANLL
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagaacaagaaagagaaaggctcgtccatcacccgggtgctggagatcatcgag
atgctgtcgcaggcgcagaggcccatggcgcctgcggatatcgcccactacctggatatc
cccaaacccagcattcaccggttgctgcagcaactggaggccgacggttttctccaggtc
gacctgcgcggcctgtgggggcctggagcgaaactgcacggcctggcgtgggcggtgctg
cgcaatcagcgcttcaagaacgagcgcatggcgatcttgcatgagttggccggcaagatc
ggagaaacatgcggtatttccattccccatgggctggatatggtttacgccgacagggtc
cacgccaactggccgctgcagatccacctgcccgaaggtagccaggtgccgatctggtgt
acggccagcggcaagctctatctgtcttcctttccccgtgcgcagcgcgaccggatcatc
agcaagctgccgttgacgcgcatgacctgcaatacgttgtgcaccctcgatgcgttgaag
gccgaactcgaccgcacttgcgagcgaggcatgggggtggataacgaggagttcgtcgat
ggcatggtggcctgttcggttcctgtcgcggacgacgaaggtgtactgctcgcgtgcctg
ttcgtccacgccccggtgattcgcgtgagtgccgagcagttgatggctttcaaacccctg
ctcaccgatgctgcggcggagctggccaatctgctctag
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