Pseudomonas mendocina ymp: Pmen_1798
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Entry
Pmen_1798 CDS
T00510
Name
(GenBank) diguanylate phosphodiesterase
KO
K26148
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pmy
Pseudomonas mendocina ymp
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Pmen_1798
Enzymes [BR:
pmy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
Pmen_1798
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GFIT
Motif
Pfam:
EAL
CSS-motif
Motif
Other DBs
NCBI-ProteinID:
ABP84562
UniProt:
A4XT96
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Position
1973972..1975534
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AA seq
520 aa
AA seq
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MPLTAYRTRRSRLRLCASLAVGMLPVVLGLMFLYAQAGIVLRDISRTSAADAVRQIDLML
DNASQAAGEVLPQVGRPCAEVELVLREQVATVPFVRSVNLMDGGRLYCSSLFGAFEEPVD
SAAYVAGRLRLLAGNPVTPNHSLLVYRDVVDERGALVAIDGRYLANVLQSVDRGAFMQLL
VGEQWMPRSGLVRAGRLPEYPLARVALSSTRYPYQVRAAFPRGARLRYMGEQYPVLFVLL
GLLGALAGVGSHWLLARSSSPSLELRRALQAGEFIPYFQPLVRSGTQQWIGAEVLMRWQH
PREGLVRPDLFIPLAESSGLIVPMTRELMRQTAELLAPVADRLGGGFHVGINIAAAHCRS
RELVEDCRNFLQAFEPGQVVLSLELTERELLEPDAFTDQLFADLHEMGVKIALDDFGTGH
SSLSYLHKLKVDYLKIDQSFVAMIGKDALSLHILDSVIDLCAKLQLEVIAEGVEDELQLR
YLGNRRVDYLQGYLFGRPLPAAEFVACALDEPAASVQLPG
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgccattaaccgcttaccgcacccgtcgttcccgattgcgactgtgcgcctctcttgcc
gtggggatgctgccggtcgtgctcggcctgatgtttctgtacgcgcaggccggaatcgtg
ctgcgcgacatcagccgcaccagcgccgccgacgccgtgcgccagatcgacctgatgctc
gacaatgccagccaggctgccggcgaggtattgccgcaggtcggcagaccctgcgcggag
gtcgagctggtgctgcgcgagcaggtcgccaccgtgcccttcgtgcgctcggtcaacctg
atggatggggggcggctgtactgctcatcgctgtttggcgcgttcgaggagccggtcgac
tctgctgcctacgtagcgggccggctgcggctgctggcgggcaacccggtcaccccgaat
cattcgttgctggtgtatcgcgatgtcgtggacgagcgcggcgcgctggtggcgatcgac
ggacgttacctggccaacgtgctgcagtcggtggatcgcggtgccttcatgcaattgctg
gtgggggagcagtggatgccgcgcagcggattggtgcgagcggggcgcctgcccgaatac
cccttggctcgggtcgcgctgagttcgacgcgctatccctatcaggtgcgtgcggcgttt
ccccgaggcgcgcggctgcgctacatgggcgagcaatatccggtgctgttcgtgctgctg
gggctgctcggggcactggccggcgtgggcagccactggctgctggcgcgctccagctcc
cccagcctcgagttgcgtcgtgcgctgcaggccggagaattcattccctatttccagccg
ctggtgcgcagcggtacgcagcagtggataggcgccgaggtgctgatgcgctggcagcac
ccgcgcgaggggctagtgcgcccggatctgttcattcccttggcggaaagctccggcctg
atcgtgccgatgacccgggaattgatgcggcagacggcggagctgctggcgccggtggcg
gatcgactcggcggcgggtttcatgtcggcatcaacatcgcagccgcacattgccgcagc
cgcgagctggtcgaggactgccgcaactttctccaagccttcgaaccgggacaggtggtg
ctgagcctggaacttaccgagcgcgaactgctggagccggatgccttcaccgatcagctg
ttcgccgacctgcacgagatgggcgtgaagatcgcactggacgacttcggcaccggccat
tccagcctgagttacctgcacaagctcaaggtggactacctgaagatcgaccagagtttc
gtcgccatgatcggcaaggacgccctgtcgctgcacattctcgacagcgtgatcgacctg
tgcgccaagctgcagctggaggtgatcgccgaaggtgtggaggacgagctgcagctgcgc
tacctgggcaatcgccgcgtggactatctgcagggctacctgttcggtcggcccttgccg
gcggcggaattcgtcgcctgcgcgctggacgagccggctgcttccgtgcagctgccaggg
tag
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