Prevotella melaninogenica: HMPREF0659_A7124
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Entry
HMPREF0659_A7124 CDS
T01286
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
pmz
Prevotella melaninogenica
Pathway
pmz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMPREF0659_A7124 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmz03400
]
HMPREF0659_A7124 (uvrB)
DNA repair and recombination proteins [BR:
pmz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF0659_A7124 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HMPREF0659_A7124 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_5
AAA_7
AAA_22
AAA_16
DUF87
Motif
Other DBs
NCBI-ProteinID:
ADK96704
LinkDB
All DBs
Position
II:complement(943944..945989)
Genome browser
AA seq
681 aa
AA seq
DB search
MNFKLTSKYKPTGDQPEAIRELTDGLERGDKSQVLLGVTGSGKTFTVANVIANVNKPTLI
LSHNKTLAAQLYEEMKAFFPDNAVEYYVSYYDYYQPEAYMPVTDTYIEKDLAINDEIDKL
RLSAVSSLLSGRKDVIVVSSVSCIYGMGAPIAMKGNVISIKKGQVIDRNDFLRRLVDALY
MRNDIELQRGNFRVKGDTVDIAMAYNDNVLRITWWDDEIDSIEEVDAVDFHRLATFDAYE
IYPANLFVTSKEQTEGAIRQIQDDLVKQVDFFTEIGDNIKAQRIKERVEYDIEMIKELGH
CSGIENYSRYFDGREAGMRPYCLLDFFPEDYLMVIDESHVSVPQISAMYGGDRARKKNLV
EYGFRLPAAFDNRPLRFEEFHDLIHQIIYVSATPADFELAESEGVVVEQVIRPTGLLDPE
IEVRPSENQIDDLMNEIVIRAEKEERVLVTTLTKRMAEELTEYLLNHDIRTAYIHSDVAS
LDRIKIINDLRAGIYDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRSHRSLTQTAGRA
ARNVNGKVIMYADNITESMQKTIDETMRRRTKQLKYNEENNITPTQIVKAIKGTLPVGGE
SNLTAETASIGRNVGQAYVEPNNGVLFAADPIVAKMSKAQLEKSIANTTILMKQAAKDLD
FLQAAQYRDEIIRLQKELEGK
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcaaattaacatcgaaatataaaccgacgggcgaccagccggaggcaatcaga
gaacttacagacggattagagcgtggtgataagagtcaggtgctcttgggtgtgacgggt
tcgggtaagacgtttacagttgcgaacgtgattgcgaatgtcaataaacccacacttatc
ttgtcgcataacaagactttggctgcacagctttatgaggagatgaaggctttctttccc
gataacgctgtggagtattatgtctcttattatgattattatcagccagaggcgtatatg
cctgtgacggatacctatattgagaaagatcttgcgattaatgacgagattgataagttg
cgtttgtcggctgtatcttctttgttatcaggtcgtaaggatgttatcgttgtgtcttcc
gtttcgtgtatctacggtatgggagcgccaatagccatgaagggaaatgtcatttctatc
aagaagggtcaagtcattgatcgtaatgattttttaagacgcttggtcgatgcgctttat
atgcgtaatgacatcgaactacagcgtggaaacttccgtgtgaagggtgatacggtggat
attgcaatggcttataacgacaatgtcctgcgtattacgtggtgggatgatgagatagat
tctatcgaagaggtggatgctgtcgatttccatcgccttgctaccttcgatgcttatgaa
atttacccagccaatctctttgttacgtctaaggaacagaccgaaggagccattcgtcag
atacaagatgacttggtgaagcaagttgatttcttcactgagataggggataacattaag
gcacaacgtatcaaggaacgtgtggagtatgacatagagatgattaaggaactcggtcat
tgctctggtattgagaactattcacgctattttgatggtagagaggcgggaatgcgtcct
tactgtttgttagactttttcccagaagattacttgatggtgattgatgagagccatgtg
agtgtaccgcagatttcagcgatgtatggtggcgaccgagcccgaaaaaagaatcttgtg
gaatatggtttccgacttcctgcagcctttgacaaccgtccgcttcgcttcgaggaattt
catgatttgattcatcagattatctatgtgtcggctaccccagctgattttgagttggct
gaatcggaaggtgttgtcgttgaacaagttatccgtcctactggtttgctcgacccagag
atagaggtgcgcccatcagagaatcagattgacgacttgatgaacgaaatcgttatccgt
gcagagaaggaagagcgtgttttggtgacgacactgaccaaacgaatggcagaggagttg
accgaatacctgctgaatcacgatatccgtacggcttatatccatagtgatgttgccagt
ttggaccgtattaagattatcaacgacctccgtgcgggtatctatgatgttcttgtgggt
gtcaatctcttgcgtgagggattggacttgccagaggtttcattggtagctatccttgat
gctgataaagaaggtttcctccgcagtcatagaagtttgacacagacggcaggacgtgcg
gctcgtaacgtgaatggaaaggtgattatgtatgccgataacatcacagagagtatgcag
aagaccatcgatgagacaatgcgaagacgtacgaagcagttgaaatacaacgaggaaaat
aatattactccgacacagattgtcaaagcaattaagggtacactgccagtgggtggtgaa
tcgaatctcaccgcagagacagcttctatcggtaggaatgtcggacaggcatacgttgaa
ccaaataatggtgttctctttgctgctgacccaattgttgcgaagatgagtaaagcacag
ttggagaagagtattgctaatacaactatcctcatgaagcaggcagcaaaagacctcgac
ttcctacaggcagcgcagtatcgtgatgagataatacgtttgcagaaggagttggaaggg
aaatag
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