Polaromonas naphthalenivorans: Pnap_3419
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Entry
Pnap_3419 CDS
T00459
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pna
Polaromonas naphthalenivorans
Pathway
pna00470
D-Amino acid metabolism
pna00550
Peptidoglycan biosynthesis
pna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pna00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pnap_3419
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pnap_3419
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pna01011
]
Pnap_3419
Enzymes [BR:
pna01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Pnap_3419
Peptidoglycan biosynthesis and degradation proteins [BR:
pna01011
]
Precursor biosynthesis
Amino acid ligase
Pnap_3419
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
AlaDh_PNT_C
2-Hacid_dh_C
CbiA
F420_oxidored
ThiF
Motif
Other DBs
NCBI-ProteinID:
ABM38716
UniProt:
A1VST8
LinkDB
All DBs
Position
complement(3625482..3626993)
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AA seq
503 aa
AA seq
DB search
MKNLAHQNILVLGLGASGLALARWCVRCGAHVTVADTRSAPPQLASLQDSVPAAKFVTSP
MDGALLAGTAFDLVLKSPGLSPASISGVLAAAQAQGIPCGNELSLFAQALADLKEDLAYA
PKVVGITGTNGKTTVTSLTGQLIERAGKSVAVAGNIGPTLLDTLTGKLDEHARDPSAALP
EFWVLELSSFQLDGVTNFEPDVATVLNITQDHLDWHETLPAYAAAKSHVYGRSGLMLLNR
NDPLVMTAVPALVKGKPGRSYLTFGGDEPKRPGDYGIETVNGMAWLVRAAEADETIKRRK
AEELVLHIQRLMPLEALRIQGRHNATNALAALGLAVAVGCPLAPMLHGLREYRGEPHRVE
SVAVLEGIEYFDDSKGTNVGATVAALAGLGSERKLVLILGGEGKGQDFSPLADPVARYVR
VVVLIGRDAPLIRAALQGSRVELLDAASMQEAVSLAAGQARPGDAVLMSPACASFDMFDN
YEHRARVFCEAVQELAVEQGAVL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacctggcgcatcaaaacattcttgtcctggggctgggtgcttcgggtctggcg
ctggcgcgctggtgcgtccgctgcggcgcgcatgtcaccgtggctgatacccggtctgca
ccgccgcagctggcgtccttgcaagacagtgtgccggcggccaaattcgtgacttccccg
atggacggggcgctgctggctggcaccgccttcgacctggtgctgaaaagccccggcctg
tcgcctgcctccatcagcggtgtgctggcggcggcccaagcgcaaggcattccttgcggc
aacgaactcagcctgtttgcacaggcgctggccgacttgaaggaagacctggcttatgca
ccgaaggtggtcggcatcaccggcaccaacggcaaaaccacggtgacctcgctgaccggc
cagctcattgagcgtgccgggaaatcggtggcggttgccggcaatatcggcccgacgctg
ctcgacaccctgaccggcaagctcgacgaacatgcccgtgatccgtcagcagcgctgcct
gaattctgggtgctggagctgtccagcttccagctcgatggcgtgacgaacttcgagcct
gacgtggcaacggtcctgaacatcacccaggatcacctggactggcatgaaaccctgccg
gcttatgccgctgccaagtcgcatgtctatggccgcagtggactcatgctgctgaatcgc
aatgatcccctggtgatgacggcagtgcccgcactggtgaagggcaaaccaggccgaagc
tacctgacgtttggcggcgatgagcccaagcgtcccggcgactacgggattgaaaccgtc
aacggcatggcctggctggtgcgcgcggcagaggctgatgaaaccatcaagcgccgcaag
gctgaagagctggtgctgcacatccagcgcctgatgccactcgaagccctgcgtatccag
ggccgccacaacgccaccaatgcgctggccgcgctcggcctggcggttgccgtgggttgt
ccgctggcgcccatgctgcatggcctgcgcgaatatcggggcgagccgcaccgggttgaa
tccgtggccgtgctggaggggattgagtattttgacgacagcaagggcaccaatgtcggc
gccacggtcgcggcgctggccggcctgggcagcgagcgcaagctggtgctgattctgggc
ggcgaaggcaagggacaggatttttcgccgctggccgatccggtggcgcgttatgtccgt
gtcgtggtgctgataggccgtgacgcgccgcttattcgggccgcactgcaaggcagccgg
gtagaactgctggacgccgcgtccatgcaggaagccgtcagcctggcggccggccaggcc
cgcccgggcgacgcggtgctgatgtcgccggcctgcgccagttttgacatgttcgacaac
tatgagcatcgcgcccgggtcttttgcgaggcggtgcaggaactggccgtggaacagggg
gctgtgctgtga
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