KEGG   Pieris napi (green-veined white): 125050211
Entry
125050211         CDS       T08706                                 
Name
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
pnap  Pieris napi (green-veined white)
Pathway
pnap03030  DNA replication
pnap03410  Base excision repair
pnap03420  Nucleotide excision repair
pnap03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pnap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    125050211
   03410 Base excision repair
    125050211
   03420 Nucleotide excision repair
    125050211
   03430 Mismatch repair
    125050211
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pnap03032]
    125050211
   03400 DNA repair and recombination proteins [BR:pnap03400]
    125050211
Enzymes [BR:pnap01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     125050211
    6.5.1.6  DNA ligase (ATP or NAD+)
     125050211
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     125050211
DNA replication proteins [BR:pnap03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    125050211
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     125050211
DNA repair and recombination proteins [BR:pnap03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     125050211
   NER (nucleotide excision repair)
    Other NER factors
     125050211
   MMR (mismatch excision repair)
    Other MMR factors
     125050211
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 125050211
NCBI-ProteinID: XP_047505857
EnsemblRapid: ENSPNPG00015039737
LinkDB
Position
6:11128685..11141846
AA seq 898 aa
MYRYNLFKISRIVTNLVNCSLYCNNSRTSHRLPVSFRSIFFLRIMSQSSIRSFFTVTPKK
PIEVKTEEQTNKSFDSDEVSPPTNGKDKISKRSRSTSTEDEINSNCASPELSEKKKPKRR
RIVSSESESDSKSDQEIKLDKTRQPKTYDSPKTKKINKIKTEKLSPVSKKSKEKSESPSA
KTDSPKVKKETVKSPRNKKEEVKSPPDKKKIASLFGKKTDLKVEDKENSKVEKDKTAEVD
YNPAKPKYHPINDACWNKGQEVPYLALAKTLENIEGTSARLKMIDILSNYLRSVMLLTPE
DLLPSIYLCLNQLAPAYHSLELGMAETYIMKAIGQCTGRTLAQVKSAARTTGDLGLVAEQ
ARATQRTMFPPPPLTLRKVFAALKEVAQATGQASVNKKIGKIQSLYVACRHSEARYLIRS
LEGKLRIGLAEQSVLQALACACAASPTAGPLAGTVDVSADMSQEKFKARVDEFSLIIKTT
YCECPNYDSIVDILLKYGVEALPQHCKLTPGVPLKPMLAHPSRGVADLFTRFDGERFTCE
WKYDGERAQIHVPGTDSPDLTKASIFSRNQENNTSKYPDVLSRLPKLLKGSVQSCVLDCE
AVAYDTANKQILPFQILSTRKRKDAQASEIKVQVCVFVFDLLYLNGSPLVRESLERRRAL
LRENFNEIEGEWEFARGRDCSSPEEVEGELAEALRGSCEGLMVKALDGDKARYDIARRSH
NWLKLKKDYLEGCGDSIDAVVVGGYHGKGKRAGHYGGFLLACYDPEMDAYQTLCKIGTGF
SDEDLRTFSETLQTHVIDAPKSYYSYENSMNPDVWFEAACVWEVRCADLSLSPAHRAALG
LVDRDKGISLRFPRFIRCRDDKRPEQATSARQVADMYLAQDQVKNTAGNKTAQEDDFY
NT seq 2697 nt   +upstreamnt  +downstreamnt
atgtatcggtacaaccttttcaagatcagtagaatagtaactaatcttgtaaattgctcg
ctgtattgtaacaattccaggacctctcacaggttacctgtttcttttagaagtatattt
ttcctacgaattatgtctcaatctagcattcggtctttctttactgtaactcccaaaaag
ccaatagaagtcaaaacggaagaacaaacaaataagtcttttgatagtgatgaagtctct
ccaccaactaatggaaaagataagatatcaaagagatcaagatctacaagtactgaagac
gagataaatagtaattgtgcatcaccagagttatctgaaaagaaaaaaccaaagcgcagg
cgcattgttagttctgaaagtgaatcagattcaaaatcagaccaagaaataaaattagat
aaaaccaggcagcctaaaacttatgactctcccaagacaaagaaaattaacaaaatcaaa
actgaaaagttaagtccagtaagtaaaaaatccaaagaaaaatctgagagtccttctgct
aaaacagacagccctaaagtcaagaaagagactgttaagtcacctagaaataaaaaagaa
gaagtaaaatcgcctccagataaaaaaaagatagcatcactctttgggaagaagactgac
ctcaaagtggaagataaagaaaatagtaaagttgaaaaagataaaactgcagaggtggat
tacaacccagcaaagccaaaataccatcccattaacgatgcatgttggaacaaaggtcaa
gaggtcccatacttagcattagccaagacgttggagaatattgaaggcacatcggctaga
ctgaaaatgatagatattctgagcaattacttacggtctgtgatgctgctcacacctgag
gatctcctgcccagcatctatttgtgcctgaatcagctggcacccgcatatcacagtttg
gaacttggtatggctgagacgtatataatgaaagcaataggccaatgcactggccggacg
ctagcccaagtaaaaagtgctgcacgcactaccggagacctgggacttgtcgcggaacag
gcgagagccacacaacgaacgatgttccctccaccgcccctaacgttgaggaaggtcttc
gctgccttaaaagaagtcgctcaagccaccggccaggcatctgtaaacaaaaagataggc
aaaatacaatcgctgtacgtcgcctgccgacactccgaagcacgctatttaataagatct
ctggaaggtaagttacgtataggtctagctgagcaatcagtcctacaggcactcgcttgc
gcatgcgctgcgtcgcctacagctggtcctctcgctggtactgtagacgtcagtgcggat
atgagtcaggagaaatttaaggcgcgcgtagatgaattctcgctaataattaaaacgaca
tactgcgagtgccccaactacgattcaatagtagatatattactcaaatatggggtggag
gctttgccccaacactgcaagttgaccccaggagtcccgctcaaacctatgctggcgcac
ccttcgagaggagtagctgatctttttactaggtttgatggcgagcgattcacatgcgaa
tggaagtatgatggcgaacgagcgcaaattcacgtgcccggtacggactcacctgatctc
acaaaagcgtccatctttagtaggaatcaggagaacaatacgagtaaatacccggatgtc
ctgagccgtttgcccaaactgctgaagggatcagtgcagagctgtgtattggactgtgag
gctgtcgcatatgacaccgcaaataaacagattttacccttccagatcctgtcaactcgt
aaacgcaaagatgcgcaggcgtcagaaattaaagtacaagtgtgtgtgttcgtctttgac
ttgctttatctgaacggatcgcctcttgttcgggaatctttggagagacgacgggctcta
ttgagggaaaacttcaatgaaattgaaggtgaatgggaattcgcccgcggtcgagattgc
agtagccccgaggaagtggaaggtgagctggcggaagcgttacgtggaagctgcgagggt
ctcatggtgaaggcgttggatggggacaaggcgagatatgatatcgctcgtcgttcgcat
aattggcttaagcttaaaaaagactacctagaaggttgtggagacagcatagatgcagtg
gtggtaggtggataccacgggaagggcaaacgagcaggacattacggcggattcctgctc
gcctgctacgaccccgaaatggatgcttatcagaccctctgcaagatcgggaccggattt
tctgatgaagaccttcggacatttagtgagacattgcagacgcatgttattgatgccccc
aaaagttattatagttatgaaaacagtatgaacccggatgtatggtttgaggcggcgtgt
gtatgggaagtgcgttgcgctgacttgtctctgtcgcctgcgcacagagcagctctcggc
ttagtggaccgggataagggcatctcacttaggtttcccaggttcatccgttgtcgtgac
gataaacggcccgagcaagcgacgagtgcacggcaggtggctgatatgtacctggcccag
gatcaagtcaaaaacacagccggaaataaaactgctcaagaagacgacttttactaa

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