Pseudomonas nunensis: NK667_04000
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Entry
NK667_04000 CDS
T08997
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pnb
Pseudomonas nunensis
Pathway
pnb00521
Streptomycin biosynthesis
pnb00523
Polyketide sugar unit biosynthesis
pnb00525
Acarbose and validamycin biosynthesis
pnb00541
O-Antigen nucleotide sugar biosynthesis
pnb01100
Metabolic pathways
pnb01110
Biosynthesis of secondary metabolites
pnb01250
Biosynthesis of nucleotide sugars
Module
pnb_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pnb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
NK667_04000 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NK667_04000 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
NK667_04000 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NK667_04000 (rfbB)
00525 Acarbose and validamycin biosynthesis
NK667_04000 (rfbB)
Enzymes [BR:
pnb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
NK667_04000 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
UTO15536
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All DBs
Position
867881..868957
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AA seq
358 aa
AA seq
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MKILVTGGAGFIGSAVIRHIISNTADSVINVDKLTYAGNLESLAEVSENSRYAFERVDIC
DRDQIDRVLREHQPDAIMHLAAESHVDRSISGPSEFIQTNIIGTYTLLEAARHYWAALDD
ARKANFRFHHISTDEVYGDLEGPEDLFTETTPYQPSSPYSASKASSDHLVRAWSRTYGLP
TLVTNCSNNYGPCHFPEKLIPLIILNALEGKPLPVYGKGNQVRDWLYVEDHARALYKVVT
EGVIGETYNIGGHNEKQNIEVVQTLCALLDEMRPDSAHRPHASLITYVQDRPGHDQRYAI
DASKIQRELGWTPEETFETGIRKTVEWYLTNTEWVDHVKSGSYQQWIDQNYADRSSKA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaattctagtaaccggcggcgccgggtttatcggttcggcagtcattcgtcatatc
atttccaatactgccgactcggtgattaatgtcgataagctgacttacgccggcaatctt
gagtcattggccgaagttagcgaaaattcgcgttatgcattcgagcgcgtagatatctgc
gaccgcgatcagatcgaccgtgtcctgcgtgaacatcaacccgatgccatcatgcatctg
gccgcagagtcccatgtcgatcgctcgatctctggtccgtccgagttcatccagaccaac
attatcggcacttacaccctgctggaagctgcacgccactattgggcggcattggatgat
gcgcgtaaagccaacttccgtttccaccatatttccaccgatgaagtctacggagacctc
gaaggtccggaagacctcttcacggaaaccacgccataccagccaagctcgccgtactcg
gccagcaaggccagctccgatcacctggttcgcgcctggagccgtacctatggcctgccg
accctggtcaccaactgctcgaacaactacggtccttgccacttccctgagaagctgatc
ccgctgatcatcctcaacgcactggaaggcaagccgctgccggtctacggcaaaggtaac
caggtccgtgactggctgtatgtcgaagaccacgctcgcgccctgtacaaggtcgtgacc
gaaggtgtcatcggcgagacttacaacatcggcggtcataacgaaaagcagaacatcgag
gtcgttcagacactgtgcgcactgcttgatgagatgcgcccggattccgcacatcgtcct
cacgccagcctgatcacctacgttcaggatcgtccgggccacgatcagcgttatgcgatc
gatgccagcaaaatccagcgtgagctgggttggactccggaagaaacgtttgagaccggt
atccgcaaaacggtcgagtggtacctcaccaacactgagtgggttgatcacgtgaagagc
ggcagctaccagcaatggattgaccagaactacgcggatcgttcgagcaaggcatga
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