Pseudomonas aeruginosa NCGM2.S1: NCGM2_0518
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Entry
NCGM2_0518 CDS
T01974
Symbol
msbA
Name
(GenBank) transport protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pnc
Pseudomonas aeruginosa NCGM2.S1
Pathway
pnc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pnc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NCGM2_0518 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnc02000
]
NCGM2_0518 (msbA)
Enzymes [BR:
pnc01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
NCGM2_0518 (msbA)
Transporters [BR:
pnc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NCGM2_0518 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
RsgA_GTPase
AAA_30
AAA_29
SLFN-g3_helicase
nSTAND3
NB-ARC
DEAD
APS_kinase
Zeta_toxin
nSTAND1
MMR_HSR1
DUF815
Motif
Other DBs
NCBI-ProteinID:
BAK87408
LinkDB
All DBs
Position
1:580664..582475
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AA seq
603 aa
AA seq
DB search
MSDSPQNPGPSSLKIYFRLLGYVKPYIGMFLLSIVGFLIFASTQPMLAGILKYFVDGLSN
PDAALFPNVQWPWLRDLHLVYAVPLLIILIAAWQGLGSFLGNFFLAKVSLGLVHDLRVAL
FNKLLVLPNRYFDTHSSGHLISRITFNVTMVTGAATDAIKVVIREGLTVVFLFLYLLWMN
WKLTLVMLAILPVIAVMVTTASRKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEA
YEEKRFHDASQSNTDKQLRMTKTGAVYTPMLQLVIYVAMAILMFLVLWLRGDASAGDLVA
YITAAGLLPKPIRQLSEVSSTVQRGVAGAESIFEQLDEAAEEDQGSVEKERVSGRLEVRN
LSFRYPGTDKQVLDDISFVAEPGQMIALVGRSGSGKSTLANLVPRFYQHNDGKIMLDGVE
VEDYRLRNLRRHIALVTQQVTLFNDSVANNIAYGDLAGAPREEIERAAKAANAKEFIDNL
PQGFDTEVGENGVLLSGGQRQRLAIARALLKDAPLLILDEATSALDTESERHIQAALDEV
MKGRTTLVIAHRLSTIEKADLILVMDQGQIVERGSHAELLAQNGHYARLHAMGLDEQAPA
PVG
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatagtcctcagaatcccggaccttccagtctcaagatctatttccgcctgttg
ggctacgtgaagccctacatcggaatgttcctactcagcatcgtcggtttcctgatcttc
gcgtcgacccagccgatgctggcgggcatcctcaagtatttcgtcgacggcctctccaat
cctgacgcggcattgtttccgaatgtgcagtggccctggttgcgcgacctgcacctggtc
tacgcggtgccgttgctgatcatcctgatcgctgcctggcaggggctgggctcgttcctc
ggcaacttcttcctggccaaggtttccctggggctggtgcatgacctgcgggtcgccctg
ttcaacaagctgctggtgctgccgaaccgctatttcgacacgcacagctccggccacctg
atctcgcgcatcaccttcaacgtgaccatggttaccggagcggccacggatgccatcaag
gtggtgatccgtgaaggcctgaccgtggtcttcctgttcctctacctgctgtggatgaac
tggaagctgaccctggtgatgctggcgatcctgccggtcatcgcggtgatggtgactact
gccagccgcaagttccgcaagcagagcaagaagatccaggtggccatgggcgacgtcacc
cacgtcgcctcggaaactatccagggctaccgggtggtgcgcagcttcggcggcgaagcc
tatgaagagaagcgcttccacgacgccagccagagcaataccgacaagcagttgcggatg
accaagaccggcgcggtctacacgccgatgctgcaattggtgatctacgtcgccatggcg
atactgatgttcctcgtgctgtggctgcgcggggacgcctcggccggcgacctggtggcc
tatatcaccgcggcgggccttttgcccaaaccgatccgccagctttccgaggtcagttcc
acggtccagcgcggcgtcgccggcgccgagagcatcttcgagcagctcgacgaagcggcg
gaggaagaccaggggagcgtcgagaaggagcgggtcagcgggcgcctggaagtgcgcaac
ctgagcttccgttatcccggaaccgacaagcaggtgctggatgacatcagtttcgtcgcc
gaacccgggcagatgatcgccctggtcggccgttccggtagcggcaagtcgaccctggcc
aacctggttccgcgcttttatcagcacaatgacggcaagatcatgcttgatggcgttgag
gtcgaggattatcgcctgcgtaacctgcgccgccacatcgccctggtgacccagcaggtc
acgctgttcaacgacagcgtggccaacaacatcgcctacggcgacctggctggcgcgccg
cgcgaggaaatcgagcgggcggcgaaggctgccaacgccaaggaattcatcgacaacctg
ccgcaaggcttcgacaccgaggtcggcgagaatggcgtgctgctttccggcggccagcgc
cagcgtctggcgatcgcccgggcgctgctcaaggacgcgcccctgctgatcctcgacgag
gcgacctcggcgctggacaccgagtcggagcggcatatccaggcggcgctggacgaagtg
atgaaagggcgcaccaccctggtgatcgcccaccgcctgtcgaccatcgagaaggccgac
ctgatcctggtgatggaccaggggcagatcgtcgagcgcggcagccacgccgagctgctg
gcgcagaacggccactatgcgcggctgcacgcgatgggactggatgagcaggcgccggcg
cctgtcggctga
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