Pseudomonas aeruginosa NCGM2.S1: NCGM2_5920
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Entry
NCGM2_5920 CDS
T01974
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pnc
Pseudomonas aeruginosa NCGM2.S1
Pathway
pnc00521
Streptomycin biosynthesis
pnc00523
Polyketide sugar unit biosynthesis
pnc00541
O-Antigen nucleotide sugar biosynthesis
pnc01100
Metabolic pathways
pnc01110
Biosynthesis of secondary metabolites
pnc01250
Biosynthesis of nucleotide sugars
Module
pnc_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pnc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
NCGM2_5920 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NCGM2_5920 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NCGM2_5920 (rmlC)
Enzymes [BR:
pnc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NCGM2_5920 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BAK92730
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Position
1:6302219..6302764
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AA seq
181 aa
AA seq
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MKATRLAIPDVILFEPRVFGDDRGFFFESYNQRAFEEACGHPVSFVQDNHSRSARGVLRG
LHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGF
VVLSEYAEFLYKTTDFWAPEHERCIVWNDPELKIDWPLQDAPLLSEKDRQGKAFADADCF
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgacccgcctggcaatccccgacgtcatcctcttcgaaccccgggtgttcggc
gacgatcgcggattcttcttcgaaagctacaaccagcgcgccttcgaggaggcctgcggt
catccggtcagcttcgtccaggacaaccattcgcgttccgcccgtggcgtcctccgcggc
ctgcactaccagatccggcaagcccagggaaaactggtgcgcgccaccctcggcgaggta
ttcgacgtggccgtcgacctgcgtcgcggctcgccgaccttcggccagtgggtaggcgaa
cgcctgagcgcggagaacaagcgccagatgtggattccggccggcttcgcgcacggcttc
gtggtgctcagcgaatacgccgagttcctctacaagaccaccgacttctgggcgccggaa
cacgaacgctgcatcgtctggaacgatcccgagctgaagatcgactggccgctgcaggat
gcccccctgctttcggagaaggaccgccagggcaaggcattcgccgacgccgactgcttc
ccctga
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