Candidatus Protochlamydia naegleriophila: PNK_1609
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Entry
PNK_1609 CDS
T04212
Name
(GenBank) Ubiquitin carboxyl-terminal hydrolase DUB-1
Organism
pnl
Candidatus Protochlamydia naegleriophila
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Gene cluster
GFIT
Motif
Pfam:
UCH
INT_SG_DDX_CT_C
Motif
Other DBs
NCBI-ProteinID:
CUI17218
UniProt:
A0A0U5JF44
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All DBs
Position
cPNK:1897524..1898699
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AA seq
391 aa
AA seq
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MHSHFSLPLLSNNQKWTVENDIIVAQPKSRNCLGNLLDFNAVVQVAHKKLVDQSKEEARR
VVHSLSAKYSHIKQAVNQHNVINRLFIKLVLWIYGFDKHFQQLENAFFNLPDNSDVLPAI
EANLLTIGASEVSPYAFSQKGGFHNGGNTCFLATALQCLQASSEILPEELKEEFNQSCES
EANAFKRQKLIQAIKSTLEKSGRQETCTAEQINELRMHLSDYDSSIPLVTGGDSILAYKS
LISIFLGQWLTITFDSKKSYTNNCLEYVVSEQHTRDKPFGKPYQMLEQTCYIHDYACQKD
KKAPLILPICLRRTNGQHTLVPQSINLANSEVIYELIAFSVNGKGHAYCYVKAGEDRWAN
YNDDQVSFCTPADVQEDLYNYGSVLIYRQMP
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcactcacatttctcattaccgcttctttccaataatcaaaaatggacggtcgaaaac
gatatcatagtcgctcaaccaaaaagccgcaactgcttaggaaatctgctcgatttcaat
gcagtcgtgcaagtagcgcacaaaaaattagttgatcaaagcaaagaagaagctagaaga
gttgttcattcactttctgccaagtattcgcatattaaacaagctgtgaatcaacacaat
gtgatcaaccgcctatttatcaaattagtcctttggatctatggtttcgacaagcacttt
cagcaattagagaacgcttttttcaatctgccggacaatagcgatgtcttgcctgccatc
gaggccaacctccttactattggtgcaagcgaggtttctccttacgcattttcgcaaaaa
ggcggatttcataatggaggcaatacctgttttctagcaactgctttgcagtgtcttcaa
gcttcttctgaaatcctgccagaagaactaaaagaagaatttaaccagtcttgcgaaagt
gaggctaatgccttcaagcgccaaaagctcattcaagccattaaaagcactttagagaaa
tccgggcgccaagaaacatgtacagcagaacaaatcaacgaattgagaatgcatttatcg
gattacgactcttccataccccttgtcacaggtggagatagcattctggcatacaaaagc
ctgatctcgatattcctaggccagtggcttaccattacttttgattcaaaaaaatcttac
acaaacaactgccttgaatatgtggtttctgaacaacatacgcgggataagccgtttggc
aagccttaccaaatgctcgaacaaacctgctatattcatgattatgcttgtcaaaaggac
aaaaaagcccctttaatccttcctatttgcctaagacgtacaaatggacaacacacgctt
gttcctcaatcgattaatctggcaaatagtgaagtaatatacgaattgattgccttttca
gttaatggtaaaggacatgcctattgctatgtcaaagcaggagaagacagatgggcaaat
tataacgatgatcaagtctccttttgcactcctgccgacgtacaagaagatctttacaac
tatggctccgttctcatctatcgtcagatgccctag
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