Candidatus Protochlamydia naegleriophila: PNK_2272
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Entry
PNK_2272 CDS
T04212
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pnl
Candidatus Protochlamydia naegleriophila
Pathway
pnl00521
Streptomycin biosynthesis
pnl00523
Polyketide sugar unit biosynthesis
pnl00541
O-Antigen nucleotide sugar biosynthesis
pnl01100
Metabolic pathways
pnl01110
Biosynthesis of secondary metabolites
pnl01250
Biosynthesis of nucleotide sugars
Module
pnl_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pnl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PNK_2272 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PNK_2272 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PNK_2272 (rmlC)
Enzymes [BR:
pnl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PNK_2272 (rmlC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CUI17870
UniProt:
A0A0U5JEC4
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All DBs
Position
cPNK:complement(2655047..2655598)
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AA seq
183 aa
AA seq
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MEIIDLRLNGLKLVKPRVFKDSRGFFLESFKQPLYQKMGIPESFLQDNHSFSQKGCIRGM
HFQSIPGQAKLVRVAVGKIYDVAVDIRPDSLTYGQWEGVILDDQEHHQLFIPVGFAHGFC
VLSDEAHVMYKVSTPYDPQHEKGFRWNDPQVKIQWPTDQPIVSERDLEALSFHESMLQLQ
GVS
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcattgatttacgtctaaatggcttaaagcttgtcaaaccgagggtatttaaa
gatagtcgcggtttttttctagaaagtttcaagcagcctctttatcagaaaatgggtatc
ccagagtctttcttgcaggataatcattctttttcacaaaaaggatgcattcgcggaatg
cactttcaatcgattccgggtcaagcgaagcttgttcgcgtggctgttggaaagatctac
gatgtagcggtcgacattcggccagattctctcacatatgggcaatgggaaggggtcatt
ttagatgatcaggaacaccaccaactttttattcccgttggttttgcacatggtttttgc
gtcttaagcgatgaggcgcatgtgatgtataaggtgagtacgccttatgatccgcaacat
gaaaaaggatttcgttggaatgatcctcaggttaaaattcaatggccaaccgaccaaccg
atcgtttctgaaagagatcttgaggctctttcgtttcatgaaagcatgcttcagctgcaa
ggagtaagctaa
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