Parastagonospora nodorum: SNOG_06807
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Entry
SNOG_06807 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pno
Parastagonospora nodorum
Pathway
pno03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SNOG_06807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pno03041
]
SNOG_06807
Enzymes [BR:
pno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SNOG_06807
Spliceosome [BR:
pno03041
]
Complex A
U2 snRNP components
U2 related factors
SNOG_06807
Complex B
SNOG_06807
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
5974059
NCBI-ProteinID:
XP_001797169
UniProt:
Q0UN57
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
MHGHRASASAIHPDYPVTHRESTWRRATLIVQGSTATVDDTLRPAVPARGLQAAEIAREI
ATEIATAVAEVVTTVTVLEIDVTTAETTAAMTVETTAETAAAHVHHPVARGHRTAEMIVT
AETTAGTTAGTTVAMIGTGVEVPRHVGQARDVLQPHRPRTSAATREERVNPEKQKEDKLA
ERAAKLLEWKKRKEAERLAQEKAGTPGSGASPAGSVPSTPAVAATPPPREAKPTVAKSKV
PKPATEKVKQKQPEKSSFKLDESAAARPLIAKPAGKPVAIAAASKYHHIDYKCSNQLTQT
DGAAAAATTKANGNIGSFGLKTKSTAEEDISSKALLDDEIDTGKRKLQALPVFATHDEPE
TTAGVEDDAAMSDIGTDDDETNAQLQAKLQSRRAELSHDQAADKDTNMEEVPTADNTGDQ
MDVDDNAGAEEDDVDPLDAFMADLSVPQQPSRAAPQGETMFNDDLEPEQTAVEGEDLLAL
RAAKKKKKEVPTINHEKVEYEPFRKDFYTEPAEITQMSAEDVADLRHELDGIKVKPDDVP
RPVTKWAQMGLLQQTMDVFTRVGYARPTAIQAQAIPIAESGRDLIGVAKTGSGKTLAFGI
PMIRHVLDQRPLKPADGPIGLILAPTRELSLQIVNELKPFLNASGITIKCAYGGQPISDQ
IAMIKRGGIHILCATAGRLIDLLQSNSGRVLSFRRITYVVLDEADRMFDMGFEPQVMKIL
ASIRPDRQTILFSATFPKTMAALARKALDKPAEVIIGGRSKVAPEITQHITIVPPSYEKK
IAKLLHHLGQTFSDDENAQVLIFTERQETAEDLLSKLFKAKYFAVNTIHGAKDQTDRNEA
INEFKQGLLNILIATSVAARGLDVPGLALVYNFDCPTHLEDYVHRCGRTGRAGNKGLAVT
LIENPGQERFAVHIVKALKESGAEVPDDLQAMANAFHEKVKSGTEKYYNVGFKGKGLDEL
DASRALDKKREKRALKLGDDDASDDEPDLPKLKKPEASGPGVAKSTNGDAAAEPVQDEPA
WKKLLLGKIVVNKTERAETGKPTTAKERAMAAARKIDGNLSRKGTVHAGQPIDNKGPDAG
LYHSTLEINDFPQKARWAVTNRTNVAKILDATGVSITTKGNFYGPGKEPGETDLPKLYIL
VEGDTEGVVTQAMLELTRLLTDATVAAEEAASTRGPTGRYSVMS
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgcacggccatcgcgctagcgctagcgcgatccaccccgactatccagtaacgcaccgc
gagtcgacatggcgacgcgccacgctgatagttcaaggttcgaccgcgaccgtggacgat
actctccgccccgccgtgcccgctcgaggtctccaggccgccgagatcgctcgcgagatc
gctacggagatcgctacggcggtggcagaggtcgtgacgaccgtgaccgtgctcgagata
gacgtgacgaccgccgagacgaccgccgcgatgaccgtcgagacgaccgccgagaccgcc
gccgctcacgttcaccaccccgtcgcgagaggtcacagaaccgccgagatgatcgttacc
gccgagacgaccgccgggacgaccgccgggacgaccgtcgcgatgatagggacaggcgtc
gaagttccccgccacgtcggccaggctcgggacgtgcttcagccacaccggccccggaca
agcgctgccacacgtgaagagagggttaatcccgagaagcaaaaggaggacaagcttgca
gagcgagctgctaagcttcttgagtggaagaagcgcaaagaagctgagcgtcttgcccaa
gagaaggcaggcacacccggctcaggagcctcgccagccggcagtgtgccttcgacccca
gcagttgctgccacgcctccaccgagggaggccaaacccactgtcgctaagagcaaggta
cccaagcccgctactgagaaagtgaagcagaagcagccggagaagtccagcttcaagctt
gacgagtctgccgcagcccgcccactcattgccaagccagccggaaagccagtggccatt
gcagccgccagtaagtaccatcacattgactacaagtgttcaaaccagctcacacagaca
gatggcgccgccgccgccgccaccaccaaggccaatggcaacataggcagcttcggcctc
aagacaaagtctacggccgaggaggacatctcctcgaaggctcttctcgatgacgagatc
gatactggcaagcgcaagcttcaagctctaccagtctttgcaacacacgatgaacctgag
accacagcaggtgtcgaggatgatgctgcgatgagcgatatcggcactgatgatgacgag
acgaacgcgcaattacaagccaaactccagtcacgtcgggctgaactttcgcatgaccaa
gctgcagacaaagacaccaacatggaagaagttcctactgccgacaacactggcgaccag
atggacgttgacgataacgcaggcgccgaggaagatgacgtcgacccccttgacgctttc
atggccgatctttctgtgcctcaacagccaagccgggccgccccgcaaggcgagactatg
ttcaacgacgacctcgaacctgagcagaccgctgtcgaaggcgaggaccttcttgctctt
cgtgctgccaagaagaagaagaaagaggtgcctacgatcaatcatgagaaagttgagtac
gagccattccgcaaagacttctacactgagcctgccgagatcactcagatgtctgccgaa
gacgttgcagatcttcgccacgagctcgatggcattaaagtcaagcccgacgacgtgcct
cgtccagtcacgaagtgggcccagatggggctgcttcagcaaaccatggatgtcttcact
cgtgttgggtacgcgaggcccactgctatccaagctcaggctatccctattgctgaatca
ggtcgtgaccttatcggagttgccaaaactggatctggcaagacgcttgctttcggtatt
ccaatgattcgccatgtgctcgatcagcgtccactgaagcctgctgatggacccatcggc
ctgatcttggctcccactcgagaactctctctgcagatcgtgaatgagctgaaacctttc
ctcaacgcgtcaggcatcactatcaagtgtgcctacggaggtcaacctatttccgatcag
attgctatgatcaagcgaggcggcatccacattctgtgtgcgactgctggccgtcttatc
gatttgttgcagagcaactccggtcgagtgctcagctttaggcgcattacttacgtcgtt
cttgatgaagctgatcgcatgttcgatatgggtttcgaacctcaggtcatgaaaattctt
gccagtatccgccctgatcgccagaccatcctcttctcagccacattccccaagaccatg
gctgctcttgcgaggaaggctcttgacaagccagcagaagtgattattggcggtcgtagc
aaggttgcacctgaaattacccagcacatcactatcgtaccgccttcgtatgagaagaaa
attgccaagctacttcatcaccttggccagaccttcagcgacgatgagaatgcccaggtc
cttatcttcaccgagcgtcaggagacagctgaggatcttctctctaagctgttcaaggct
aagtattttgccgtcaacacaattcatggagcaaaagatcaaaccgatcgcaacgaggct
atcaacgagttcaagcaaggtctacttaacattttgatcgccacatcagtggcagctcgc
ggtctcgatgtacccggcctagccttggtgtataactttgattgcccaacacatttggaa
gactatgtgcaccggtgtggtcgtactggccgtgctggcaacaagggccttgctgttacg
ctaatcgagaaccctggtcaggagcgttttgctgttcacattgtcaaagctcttaaggaa
agcggagcagaagtacctgatgatctacaagctatggctaacgctttccatgagaaagtg
aagtcgggtaccgagaagtactataatgttggtttcaaaggcaagggtctcgacgagctc
gatgcgtcgcgtgctttggacaagaaacgcgagaagcgtgcactcaagcttggcgatgat
gacgctagcgacgacgaacccgacctccccaaactcaagaagccagaggcgtccggtccg
ggtgtcgctaaatctacgaatggagacgctgctgccgagccggttcaagatgagccagcc
tggaagaagctgttgttaggcaagatagtcgtcaacaagactgagcgcgctgaaactggc
aagccaacgactgctaaagagcgagccatggcggctgcgaggaagatcgatggcaatttg
agtaggaagggcaccgttcacgccggccagccaatcgacaacaagggtccggatgctggc
ctctaccattccaccctcgagatcaacgactttccccagaaggcgcgatgggcagttacc
aatcgcaccaacgtcgccaagattttggatgcgaccggtgtgtccattaccacaaagggc
aacttttatgggccaggcaaagaaccaggagaaacggatttgcccaagctatacattctc
gtcgaaggcgataccgaaggtgttgtcactcaggcgatgttggagctcactcgtctcctg
acagatgccactgttgctgcagaggaggctgcttcaactcgtggccctacaggccgctac
agcgtcatgtcataa
DBGET
integrated database retrieval system
