Paenibacillus naphthalenovorans: IJ22_28900
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Entry
IJ22_28900 CDS
T04167
Name
(GenBank) HemD protein
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
pnp
Paenibacillus naphthalenovorans
Pathway
pnp00860
Porphyrin metabolism
pnp01100
Metabolic pathways
pnp01110
Biosynthesis of secondary metabolites
pnp01120
Microbial metabolism in diverse environments
pnp01240
Biosynthesis of cofactors
Module
pnp_M00924
Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide
pnp_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
pnp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
IJ22_28900
Enzymes [BR:
pnp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
IJ22_28900
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
IJ22_28900
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEM4
TP_methylase
Death
Motif
Other DBs
NCBI-ProteinID:
ALS23263
UniProt:
A0A0U2MY70
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Position
complement(2843730..2845271)
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AA seq
513 aa
AA seq
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MNKGVVYLVGAGPGDPKLITLRGLEAIQRADVVVYDRLASPRLLKHMKAGAEKIFVGKLP
DKHMMKQEEINRLLVDLALQGKIVTRLKGGDPSVFGRVGEEAELLADNGIKFEIVPGITS
AIAVPAYAGIPVTHRDFTSSFSIVTGHEYKNKTYSSVNWDNLSQASGTLIFLMGVANLEQ
ICNRLIHGGKSPETPVALIRWGTWMEQETLTGTLTDIAEKVRAANFQSPAVTIVGEVVKL
RDKLSWFEKKPLFGRRILVTRARSQASDLANQIDELGGEAVEFPVIRTQQTTDPAAQALR
DDAISSVEQFDWIMFTSVNGVEFFFQRMRELRKDIRSLAKARIAAVGPKTAEALEERGLM
IETIPSRYQGDALPEALAAELQPNQRVLLPTANIARDALPHKLKELGLHVTKIDMYETVL
ETDHGDEIIELLKQGKIHIVTFTSSSTVTNLLRALKELGEHEPVELLRGCNIACIGPLTA
QTALDAGLNVDYMAKEATVSSLVASLYQQDSGE
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagggtgtcgtttatcttgtcggtgccggaccaggggatccgaagctgattacg
ttgagaggcttggaggcaatacagcgggccgatgtggttgtttacgacagacttgccagc
ccgcgtctactgaagcatatgaaggccggtgcggagaaaatttttgtgggcaagctgccc
gacaagcatatgatgaagcaggaggaaattaaccggctgctggtcgaccttgcgcttcaa
ggaaagatcgtgacccggctcaagggcggagatccgagcgtgttcggacgtgtgggagag
gaagctgagctgctcgcggacaacgggatcaagtttgaaattgttcccggcattacttct
gccatcgccgtgccggcttatgccggaatcccggtaacgcatcgcgattttacttcttcc
ttttccatcgtgacggggcatgaatataaaaataaaacatactccagcgtgaattgggat
aacttgtcgcaagcgtccggcacacttatttttttaatgggtgtggctaacctagagcaa
atatgcaaccggctgattcatggcggcaaatctccggagactcctgtggcgctcattcga
tggggaacttggatggagcaggaaacattgacgggaacattgacggatatcgcggaaaag
gtgagagcagccaattttcaatcgccggcggttacgatcgttggcgaagtcgtgaagcta
agagacaagctctcctggttcgagaagaagccgctcttcggacggcgaatcctggtcacc
cgtgcgcgcagtcaagccagtgatttagccaaccaaatcgatgaactgggcggagaagcg
gtggagtttccggtgattcgtacacagcagacaaccgatcccgctgctcaagcgctgcgg
gatgacgccataagctctgtggaacaatttgactggattatgtttacaagcgtaaacggt
gtggagtttttctttcaaagaatgcgggagctgcgtaaggatatacgctctcttgcgaag
gcgcgtattgcggccgtcggtccgaaaacagcggaagcgttggaggagcgaggcttgatg
attgaaacgatcccttcacggtatcaaggggatgcgctgcccgaagcattggctgccgag
ctgcagccgaatcagcgtgtgcttcttcctacagcgaatatcgccagggacgcgctgcct
cataagctcaaggaactcggtttgcatgtaaccaaaatcgatatgtatgagacggtgctg
gaaaccgatcacggtgatgaaatcatcgagctgctcaagcagggtaaaattcatattgtc
acgtttacaagctcatctacagtaacaaatctgcttcgcgcattaaaggagcttggcgag
catgagccggttgaattgctccggggctgcaacattgcttgtatcggtccgttaaccgcc
caaactgctttggatgcaggactgaatgtagactatatggccaaagaagcgacggtttcg
tcgcttgtggccagcttatatcaacaggatagcggcgaataa
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