Pseudomonas nitroreducens: G5B91_06435
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Entry
G5B91_06435 CDS
T08828
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pnt
Pseudomonas nitroreducens
Pathway
pnt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
G5B91_06435 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnt03400
]
G5B91_06435 (recD)
Enzymes [BR:
pnt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
G5B91_06435 (recD)
DNA repair and recombination proteins [BR:
pnt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G5B91_06435 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
Helicase_RecD
SH3_13
UvrD-helicase
AAA_28
NTPase_1
SLFN-g3_helicase
PhoH
HerA_C
AAA_16
nSTAND3
T2SSE
AAA_17
Motif
Other DBs
NCBI-ProteinID:
QIE85925
UniProt:
A0A6G6IS09
LinkDB
All DBs
Position
1360703..1362745
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AA seq
680 aa
AA seq
DB search
MKSTTEMLELIGRWAERGWLRELDRAFATFLVERAPDAHPLLILAAALASHQLGRGHVCL
DLDATLADSRFALSLPPEGDSAKDAPELPGVLLDGFNLDGWRAVLNDPRLVGDGPGETPL
VLSGRRLYLRRYWQYEREVRAGIDQRLKQGEALRAALPAAQLRRALDALFPKKPGNVQTS
QGADWQKLACALVAGNAFGIVTGGPGTGKTTTVVKLLALLQSLALGEGGRALRIRLAAPT
GKAAARLNESIAGAVQRLDLSGLANGEAAREAIPTEVTTLHRLLGSRPDSRQFRHHAGNP
LALELLVVDEASMVDLEMMASLLAALPPRARLILLGDKDQLASVEAGAVLGELCSRAREG
HYRPATRDWLQAVTGDAIDDVLIDSAGSDLDQAVAMLRHSHRFSADSGIGQLAEAVNAGD
IPALRQVWKAQHEDLARIAVDAQETRSLRDLVIDGGRGGDLFGPVGYAHYLRVVSGSRPA
DNATQDALDAWARQVLGAHGQFQLLCALRRGPWGVEGLNTLIGELLQREGLIPSANGWFA
GRPVLVTRNDYGLGLMNGDIGITLALPQTADDGSVRWVARVAFPAGDGTDAIRWILPSRL
QAVETVFAMTVHKSQGSEFTHAALLLPDSLNPILTRELVYTGITRARQWFTLASAGRGWQ
VLEAATERRVQRASGLLSGI
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcaccactgaaatgctcgaactgatcggccgctgggctgagcgcggctggctg
cgcgagctggaccgtgccttcgcgaccttcctcgtcgagcgcgcgccggatgcccacccg
ctgctgattctcgccgccgccctggccagccaccagctcggccgtgggcacgtctgcctc
gacctggatgcgaccctggccgacagccgcttcgccctgtcgctgccgccggagggcgac
tccgccaaggacgcgccggagctgcccggtgtgctgctcgatggcttcaatctcgatggc
tggcgcgccgtgctgaacgatccgcgcctggtcggtgacgggccgggcgagacgccgctg
gtgttgtccgggcgccgcttgtatctgcgccgctactggcagtacgaacgggaagtgcgc
gccggcatcgaccagcgcctgaagcagggtgaggcgctgcgggccgccttgcccgccgcc
cagctgcgccgggcgctcgatgcattgttcccgaagaagcccggcaatgttcagacgagc
cagggggcggactggcagaagctcgcctgcgcactggtcgccggcaacgccttcggtatc
gtcaccggcggccccggcaccggcaagacgaccaccgtggtgaagctgctcgccctgctg
caaagcctggcgctgggggagggcggaagagcgctgcgcattcgcctcgccgcgcccacc
ggcaaggccgctgcgcgcctgaacgaatccatcgctggcgccgtgcagcgcctcgacctc
tccggcctggccaatggtgaagcggcgcgtgaggcgatccccaccgaagtcaccacgctg
catcgcctgctcggcagccgcccggacagccgccagttccgccaccacgccggcaacccg
ctggcgctggagctgctggtggtggacgaagcgtcgatggtcgacctggaaatgatggcc
tcgctgcttgccgctctgccgccgcgcgcgcgattgatcctgctgggcgacaaggaccag
ttggcctcggtggaagccggcgcggtgctgggcgagttgtgcagccgcgcccgtgagggc
cattaccgcccggccacccgcgactggctgcaagccgtgaccggcgacgccatcgacgac
gtgctgatcgacagcgccggcagcgacctcgaccaggccgtggccatgctccgtcacagt
catcgcttcagcgccgacagtggcatcggccagttggccgaagcggtcaatgccggcgat
atcccggcgttgcgccaggtgtggaaagcgcagcacgaagacctcgcccgtatcgccgtg
gatgcccaggaaactcgcagcctgcgcgatctggtgatcgacggcgggcgaggcggtgac
cttttcggcccggtcggctacgcccactacctgcgcgtggtcagcggctcgcgcccggcg
gacaacgccactcaggacgcactggatgcctgggcaaggcaggtgctcggagcccacggc
cagttccagttgctctgcgccttgcgtcgcggaccctggggcgtggaaggattgaacacg
ctgatcggcgagctgctgcagcgcgaagggctgattccttcggcgaacggctggttcgcc
ggccggccggtgctggtcacccgcaacgactacggcctggggctgatgaacggcgatatc
ggcatcaccctggcgctgccgcagacggctgacgatggttcggtgcgctgggtcgcgcgc
gtggctttcccggcgggcgacggcaccgacgccatccgctggatcctgcccagccgattg
caggcggtggaaacggtgttcgccatgaccgtgcacaagtcccagggttcggagttcacc
cacgctgcgttgttgttgcccgacagcctcaaccccatcctcacccgcgagttggtctac
accggcattacccgcgcgcgccaatggttcaccctggccagcgccgggcgcggctggcag
gtgctggaggcggccacggagcggcgagtacagcgggcgagtgggttactgagtggcatt
tga
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