Paenarthrobacter nicotinovorans: JMY29_06680
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Entry
JMY29_06680 CDS
T08055
Name
(GenBank) Ig-like domain-containing protein
KO
K20276
large repetitive protein
Organism
pnv
Paenarthrobacter nicotinovorans
Pathway
pnv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pnv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JMY29_06680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
fn3
Motif
Other DBs
NCBI-ProteinID:
UKF05265
LinkDB
All DBs
Position
1414534..1420668
Genome browser
AA seq
2044 aa
AA seq
DB search
MTLTNGSGNRRGKIRRRRVITATAFTAAAAVLVTGAILYPGFKTTEVDLNDGGVWVVSKS
KNAAGRLNYPSKSLDGAVTPASKDFDILQQASDVFIDDADGATINPVSAANMRLGGDQKL
PGSAAVSFGNKVLAVTDPSKGKVWALTAGSVGGFSDEAEPVLEQSTGIVSVVGTDDTIHT
VDPETGSLTATKVDANGQSVDSQVRKDDALKGAGDLQLTAVGDKAVVLNEATGNIVLPGG
ATVHLDDARDAKLQQSGTAADFVAIATKKALLLQPLDGSTAKTIRADGEGVPAAPVHLGS
CTYAAWSGANKYLRECTNEADNRRADVPKASASPSYVFRVNRDLVVLNDVNSGNVWMVNQ
NMQLVNNWDDVIPPQQTSDDADKDSADEVQQTVLPDRSKPNTPPVAKPDAFGVRAGKTTL
LPVLDNDADSDGDVLTVSADQVLKSGALAPVYGGTGFQITVPADQSGSESFKYSVDDGRG
GTASTTVDLRIVPPGENAAPQQKPNRNNALVVQAGKIANQYILSDWIDPDGDDLFAVAAS
SSDPADQVRIRPDGLLTFQDSGAGPGKKTISVTVSDGTLSSEGRISVDVRAPGALPPIAN
ADHVVAVAGQDTVIAPLKNDSDPQGGTLRLAQAQADDQATAVIGPDQQTFSFNSTSVGPH
YVTYMVTNGPASAQQLVRVDVVSGSNDGAPVAVRDIALLPSGGSTVVDVLGNDSDPAGGV
LVVQSVTAADGLPVTVAVLDHSVVKITDIHATGQLSLKYTISNGKASATGDISVQVVPAP
SKLQAPQAKPDEVSVRVGDVVTIPVLENDSDPNGGELTLDPVLAQQPDAADGRMFIAGNY
LRFIAGDVPKTVYAIYKVSNSSGQTDSQQVTIRIRARDDATNTRPEPRNLTARVVAGMTV
KIPVPLDGIDADGDSVQLIGVDKAPAMGTAVVRDGYMEFTAGGKSAGTDTFSYRVRDRIG
AENTGTVIVGIAPAEANNQKPIAVDDAIDVRPGRRIAVDALKNDSDPDGDPIGLVNSFEA
NPDLQVEAASGKILLTAPGVAGTESISYRIQDDKKAEASAVVRVQTSPTAALHVPVAVDD
RVTLAETLGKTAVDVPVLKNDSDPDGVAEDLTISLPDGNPNARVGTAGNVVVTLVPQEQL
IPYTVTDMDGQSATAVMWIPGQGLQYPTLAKTEPVEVMSGKDVTLALQEYVRVREGRQAR
ITVADKIRVQGGDPSNVISGDGNALRYAAQADYVGPGSITFEVTDGSGPDDSQGLKSTLT
ILTKVIPDPNANHPPTFSGASVEAPKGETTDVELANLAKDVDERDQGNLKFELDGQQAAG
FQAKVEGTVLKITPDLSLNPGAVGSFPLKVTDGRSDAVRATVTATVVSSNRPRPVANDDA
VEKANAGRSETVNVLANDFNPFNDAPLTIENAAVETGSAAGQPTVSGESITVTPADGFKG
VMVVRYTVLDKTKDPSRQATGRVRITVRDKPDAPSAPVATDVRSRTAVLKWTPPSDNGAA
ITKYTVKAAGFEQVCPTTTCTLSGLTNNVKYVFTVYATNEVGDSPASTASNEIRPDEKPS
PPDAPTVKAGDKNMAITWTPAKTEGSPVKHYNLEISPPPANGIAVKNEVTGLTYTWPGLT
NGVKYKVRAQAVNELGPSDWGMYSVEDNPAGLPGAPAAPTTAVVQSVGAQNQIRADWTEP
DVNGDPIKAYYVTMSGGNGVPQTQTIPGNVRSAVFTAQNDEKGYTFTVQAENKAGKGSVS
APSAPRRATGMLGTVNNVSATPANTGGAGRAVTINFTVLDQSQRNGSSQSEVSYRYVAST
GQSGPISPGQTVSGFTNGQATTITVNAVSTVAPSSNPSAPATTTPYGSPGTPSASGANGG
QNQTTLTLNWSSPSTGSNDVAATKIRITGGGTDTGWINESASGSRVVNTGGYNQTRTIQV
QTFNSVGQGGAVASASAQSGPQKTSWDATLPAGSFRTCTDTAASGQTSWDPNTPGHRCDG
VVYGTPWQYESNGSFTVNCYINRSTPYLNYAAWYRLTSGPNAGRFIAQGNTTLGDPGPHQ
IPQC
NT seq
6135 nt
NT seq
+upstream
nt +downstream
nt
atgactctgaccaatgggtccgggaatcgtcgtggcaagatccggcggcggagggttatc
acggctaccgccttcacagccgccgcagcagtgctcgtgacgggtgccattctctacccc
gggttcaagaccactgaagtggacctgaacgacggcggtgtctgggtagtcagcaagtcc
aagaatgccgccggccggctcaactatccgtccaagtccctggatggtgccgtcactccg
gccagcaaggacttcgacatccttcagcaggccagtgacgtgttcattgatgatgccgac
ggcgccaccatcaatcccgtcagcgccgccaacatgcgcctgggcggagaccaaaagctc
ccggggtcggcagctgtaagcttcggcaacaaggtcctggccgtcaccgatccctccaag
ggcaaagtctgggcgctcacagccggttcggtcggcggattcagtgacgaggccgagccc
gtcctggaacagtccaccggcatcgtgtccgtcgttggcaccgacgacaccatccacacc
gtggatccggagaccggcagcctgacggccaccaaagtcgatgccaacggccagtcggtg
gattcccaggtccgcaaggatgatgcgctgaagggcgccggcgacctccagctgaccgcg
gtgggggacaaggctgtggtcctcaacgaggccacaggaaacatcgtcctgccgggcgga
gccaccgtccacttggacgacgcccgcgacgccaagctccaacagagcgggactgccgcg
gacttcgtggccatcgccaccaagaaggcactgttgctgcagcccctggacggcagcaca
gccaaaaccatccgagctgacggcgaaggcgtgcccgcagcgcctgtccatctgggctcc
tgcacctacgcggcctggtccggggccaacaagtacctgcgcgagtgcacgaacgaggct
gacaaccgccgcgctgacgtccccaaggcgagtgcgtcgccgtcgtacgttttccgggtc
aaccgggacctcgtggtactgaacgacgtcaactccggcaacgtctggatggtcaaccag
aacatgcagctggtcaacaactgggacgacgtcatcccaccccagcaaacatccgacgac
gccgacaaggactccgcggacgaagtccagcagacagtccttccggaccgcagcaaaccg
aacactccacctgtcgcgaagccggacgcttttggcgtgcgggcgggtaagacaacgctc
ctgcccgtgcttgacaacgacgccgactccgacggcgatgtcctgaccgtctcggccgat
caggtgctcaaatcgggggcgttggcccccgtgtacggcggcacgggtttccagatcacg
gttcctgccgatcagtccgggagcgaatcgttcaagtactccgtggatgacggccgagga
gggactgcctcgaccactgtggatctgaggatcgttccccccggtgagaacgccgcaccg
cagcagaagcccaaccggaacaacgccttggtggtgcaggccggaaagatcgccaaccag
tacattctcagtgactggatcgaccccgacggcgatgacctgttcgccgtggcggccagc
agcagcgatcccgcggaccaggtgcggatcaggcccgacgggcttttgacgttccaggac
tcgggggccggtccggggaagaagacgatttccgtgacggtctccgatggcacgttgagc
tccgaggggcggatcagcgtggatgtccgtgcgccgggagccctgccacccattgccaac
gcagaccacgtggtggccgtcgccggccaggacacggttattgcacccctcaagaacgac
tccgatccacagggaggcacgctccgcctggctcaggcgcaggcggatgaccaggcgacg
gccgtgataggtccggaccagcagaccttctcgttcaactccacgagtgtcggtccgcac
tacgtcacctacatggtcaccaacggacctgccagcgcgcagcagctggtgcgcgtcgac
gtcgtgtccggcagcaacgacggcgcgcccgtggcggtgcgcgatatcgcccttcttccc
agcggcggcagcacagtggtggacgtgcttggcaacgactcggacccggccggcggcgtg
ctggttgtccagtccgtgacagccgcggacggcctgccagtcacggtggcggtgctggac
cactcggtggtcaagatcaccgatatccatgccacggggcaactttccctcaagtacacg
atttcgaatggcaaggcctccgccaccggagacatctcggtccaggtggtccccgccccc
agcaagctgcaggcaccgcaggcgaagcccgacgaagtttcagtacgggttggcgatgtg
gtcacgatccccgtcctggagaacgattccgaccccaacggcggtgagctgaccctcgat
ccagtcctggcgcagcagccggacgcggccgacggacggatgttcatcgcgggcaattac
ctgcgcttcattgcgggcgacgtccccaagacggtgtatgcgatctacaaggtcagcaac
tcctcggggcagaccgactcgcagcaggtgaccatacgcatccgcgccagggatgacgcc
accaacacccgccctgagccccggaacctgaccgcacgggtcgtcgccgggatgaccgtc
aagatcccggtcccgctggacggcattgacgccgacggcgactccgtccagctcatcggc
gtggacaaagcacccgcgatgggcaccgctgtggtgcgggacggctacatggagttcacc
gccggcggcaagtctgccgggacggataccttcagctaccgcgtgcgggaccgcatcggc
gccgaaaacacaggcaccgtcattgtggggatcgctccggcagaggccaacaaccaaaag
ccgatcgccgtcgatgacgccattgatgtccggccggggcgccgcattgcggtggatgcc
ctcaagaacgactccgatccggacggcgaccccatcggcctggtcaattcgttcgaagcc
aatcctgatctccaggtggaagctgcctccggcaagatcctgctgacggcacccggcgtt
gccggaaccgagagcatcagttaccggatccaggacgacaaaaaggccgaagccagcgct
gtggtcagggtccagacaagtccaacggcggccctccacgttcctgtggctgtggacgac
cgcgtcacactggctgagacgttgggcaagaccgccgtcgacgttccggtattgaagaac
gactccgaccccgacggcgtcgccgaggacctcaccatttcactgccggatggaaatcca
aacgcacgggtaggtaccgccggcaacgtggtagtgaccctcgtcccgcaagagcaactg
atcccgtacaccgtcacggacatggacggtcagtcagccaccgccgtgatgtggattcca
ggccagggcctccagtacccgaccctggcaaaaacagaacctgtggaagtgatgtccggc
aaggacgtcacgctggcgctgcaggaatatgtccgcgtccgggaaggccgccaagcccgc
atcaccgtggcggacaagatccgcgttcaaggcggggacccctcaaacgtcatctccggt
gatggaaacgcgctgcggtacgcagcccaagccgactacgttggccccggatccatcacc
ttcgaggtcactgacggctccggcccggacgattcccaagggttgaagtccacgttgacc
atccttaccaaggtcattccggaccccaacgccaaccacccgccgacctttagcggagca
tccgtggaagctcccaagggtgagactacggacgttgaactggccaacctggccaaggac
gtcgacgaaagggaccaaggcaacctgaagttcgagctcgacggccagcaagcggcaggt
ttccaggccaaagtggaaggtaccgtccttaagatcaccccggacctctcgctcaatcca
ggggccgtaggctcgttcccgctcaaggtcaccgatggccgctccgacgcggtgcgcgca
actgtcaccgccaccgtcgtctcgtctaaccggccgcggccggttgccaacgacgacgcc
gttgagaaggccaacgcgggccgttcggaaacagtgaacgtcctcgccaacgacttcaat
cctttcaacgacgcaccattgaccatcgaaaacgcggcagtggagaccgggtccgccgcc
ggccagccgacggtgtcaggagagtcgatcaccgtcaccccggccgatggtttcaagggt
gtcatggtggtccggtacacggtgctggacaagaccaaggacccttccaggcaagcaacc
ggccgtgtccgcatcacagtgcgggacaagcccgatgctccgtccgcccccgtagcgacc
gacgtcaggagcaggactgccgtcctcaagtggacgccgccgtcggacaatggcgcagcc
atcaccaaatacaccgtgaaggcggcaggtttcgagcaggtatgcccgaccaccacctgc
acgctgtccggactgaccaataacgtgaagtacgtgttcaccgtttacgccacgaacgag
gtaggcgactcgccggcatccacggcgtccaacgaaatccggcccgatgagaagccctcg
cccccggatgcccccacggtcaaggccggggacaagaacatggcaatcacctggacccct
gccaagacggaggggtcgccggtgaagcactacaacctggaaatctcaccgcctccggcc
aacggcattgccgtgaagaacgaggtcaccggactcacatacacctggccgggactgacc
aatggtgtgaagtacaaggtgcgtgcccaagcggtcaatgagctcgggccctccgattgg
ggcatgtattccgttgaggacaaccccgcaggcctcccgggggcaccggcggctcccact
accgctgtggtgcagtccgtgggagcccaaaaccagatccgcgccgattggacggaaccg
gatgtcaatggtgatcccatcaaggcgtactacgtcaccatgagtggtggcaatggggtg
ccccagacgcaaacgatcccaggcaacgtccgctccgcagtcttcaccgcacagaacgac
gaaaagggctacacattcactgttcaagcggagaacaaggccggaaagggaagcgttagt
gcgccttccgctccccggcgtgccacgggcatgctcggcaccgtcaacaacgtgtcggca
accccggccaacaccgggggagcaggtcgtgcggtgaccatcaacttcaccgttctcgac
caaagtcaacgcaatgggtccagccaaagcgaagtgagctaccgctacgtcgccagtacc
ggacagtcgggtcctatcagcccagggcagacggtgagcggcttcaccaatgggcaggcc
accaccatcacggtcaatgccgtgtccacggtggccccaagctccaatcccagcgcaccc
gccaccaccacaccgtatggttcgcctggcaccccctcggcgtccggtgccaacggtggc
cagaaccaaaccacgctgacccttaactggtcctcgccttccacgggcagcaacgacgtc
gccgcgaccaagatcaggatcaccggcggcggaacggacaccgggtggatcaacgaatcc
gcctccggcagccgggttgtgaacacgggcggatacaaccagacccggaccattcaggtc
cagaccttcaactcggtgggccagggtggagccgtggcttcggccagtgcccagagcggt
ccgcagaagacgtcgtgggacgctacgctgccggccggcagtttccgtacctgtacggac
acggcggcatcgggacagacgtcctgggacccgaacacgccgggccaccgctgtgacggc
gtggtctacggcaccccgtggcagtacgagtcaaacggttcctttacggtcaattgctac
atcaaccgcagcaccccgtacctgaactacgcggcgtggtaccggctgaccagcggtccc
aatgccggacgcttcattgcgcagggcaacaccaccctgggcgatcccggaccccaccag
ataccgcaatgttga
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