Paenarthrobacter nicotinovorans: JMY29_15410
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Entry
JMY29_15410 CDS
T08055
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
pnv
Paenarthrobacter nicotinovorans
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
zf-HC2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
UKF03134
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Position
3317105..3318616
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AA seq
503 aa
AA seq
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MTGHTGKTPENPSDEELISSVQGQDAAAIEELYRRHAAAGLSYAKKLLGNGFDADDVSSE
AFLKVIHAIQRGNGPDGPFRPYLLRAIKTSAADHWTARSRHELVEEPMELPHDEDGYEDI
LHEKDRELAGAAFASLPARWQTVLWHVDVEGERPRQVGPLLGLEPNAVSAIAARARKGLR
LAYLEAYVDSSLDETCKPYVPLLAKSVVDGLSPFEDVRLQKHLAKCLACTSAATALMDVR
STMRRAVAPWLVGPAAVPVMIGSGAVALPATTGTQLPGAQATTGSAAHSAGMGIGAWAAA
IAVVACVATGAIAVATGLGSTPSATDAANSPAEAGPLGAPPAGGTPADGGPGPGSAGVPP
AGVSPDYAVISLDQPRAEALQVPLPVSIRPIPTDSPAGSTPETTPREEPRFPQQGTTAAP
TIAGPTPGFSPTSLPTSTPLPTNATPGPSPSETHQPSPTATPTQTPTVAPTPTPTSTSVP
TPTPTPTVTPGEPCPWWWWFCTP
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggcataccgggaaaacaccggagaacccatcggacgaagaactgatctcttcc
gtccagggccaggacgccgcggccatcgaagagctttaccggcgccatgccgctgccggg
ctttcctacgccaagaagctattgggcaacggcttcgacgccgatgacgtcagctccgag
gccttcctcaaggtcattcatgccatccagcggggaaacggaccggatggccccttccgt
ccctatctcctgcgggccatcaagacctcagctgcggatcattggacagcacgctcacgc
cacgaactcgtggaggagccgatggagttgccccacgacgaggacggctacgaggacatc
ctgcacgagaaggaccgggaactggccggcgctgctttcgcgtccttgccggcccgttgg
cagaccgtgttgtggcatgtggacgtcgaaggcgaacggccccgccaggtagggccgctg
ctgggcctcgaacccaacgccgtttcagccattgcagcccgggcccgaaagggactccgg
ttggcttatctggaggcctacgtggattcctccctcgatgagacgtgcaagccgtatgtg
ccgctgctggccaagtcggtagtcgacggattgtctccgtttgaagacgtgcggctgcag
aagcacctcgcaaaatgcctcgcctgcacctcagctgccacggccctgatggatgttcgg
tccacgatgcggcgggctgtcgcgccctggctggtgggaccggccgccgtgcccgtgatg
attggttccggagccgtagccttgcccgccacgacaggcacacaacttcccggagcccaa
gccaccaccggttccgcagcgcactccgctggaatgggaatcggagcgtgggccgccgcc
atcgccgtggttgcctgcgtggcaaccggcgctatcgccgtcgcgacaggcttgggttca
accccgtcagctacggatgcggcgaattctccggccgaagcgggaccccttggcgcgccg
ccggcaggaggcaccccagcggacggcggcccgggtccgggcagcgccggggtgccgccg
gcaggggtcagtccggattacgccgtgatctcactggaccagccacgtgccgaagcactc
caagtcccgctgcctgtatccatccgcccgattccaacggactcccccgccggttcgacg
ccggagaccacccccagggaggaacccaggttcccacaacaaggcaccacggcagcgccg
accatcgccggtcccacgccgggcttctccccgacatccctgccgacgagcacacccctg
cctacaaacgccactcctgggccgagccccagcgaaacgcaccagccaagccccacggca
acgccaacgcaaacacccactgtggcacccacccccacgccgaccagcacaagtgtgcca
acacccacgcccactcctaccgtcacaccaggggaaccctgcccctggtggtggtggttc
tgcactccgtag
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