Pseudodesulfovibrio nedwellii: SYK_00450
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Entry
SYK_00450 CDS
T09024
Name
(GenBank) hypothetical protein
KO
K02519
translation initiation factor IF-2
Organism
pnw
Pseudodesulfovibrio nedwellii
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pnw03012
]
SYK_00450
03029 Mitochondrial biogenesis [BR:
pnw03029
]
SYK_00450
Translation factors [BR:
pnw03012
]
Eukaryotic type
Initiation factors
MTIFs
SYK_00450
Prokaryotic type
SYK_00450
Mitochondrial biogenesis [BR:
pnw03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
SYK_00450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IF-2
GTP_EFTU
IF2_N
MMR_HSR1
GTP_EFTU_D2
Ras
Arf
FeoB_N
ATP_bind_1
MeaB
Roc
SRPRB
MMR_HSR1_Xtn
AAA_23
DUF6522
Motif
Other DBs
NCBI-ProteinID:
BDQ35685
LinkDB
All DBs
Position
complement(45227..48187)
Genome browser
AA seq
986 aa
AA seq
DB search
MTAKVRVEDLAVELKLSNKEIIQQLREIGVQAKSQKTVVEDEDVDRLKAEMKKGGSGKRE
VRRVSDSGVIIRRRRNKSKAPKEEEAATPIEDTVEEVVETPVEEVAETPVKEEAAPVKEA
KEPKAEKKPAKKKAPKKAAPQVKVIKPAVEEKPEEIKAEVVETPVPEAVVEEAAPEPVPE
KTEAAPKAEAKEEAPAEPVEKAKPAQKAEKPKKAEKKAPAEKTAKDEVAAKAEPKKKKKK
KREPEAPKVKIISMPTEAEVQARAAAKMAQPERRPGGRPGGGRPGGGRPGGGRPGAGRPG
AGRPGGGRPDNRPGGGRPAGARPGGGRPGTAPAPNPALPDGRSKKKQGKKRRVVEFGAGG
NDRSNKNFNDGFPQGRKGRKKKGRKNQTPQHEQVQAQPMKAAKRKIKFDETIRLADMAHQ
MGIKAQDLIKALFTMGVMATINQSLDLDTATLLASEFGYEVENVSFDEQEFLVPTEADKD
EDLKPRPPVVTIMGHVDHGKTSLLDAIRLSHVTDGEAGGITQHIGAYHVNTARGEVVFLD
TPGHEAFTTMRMRGAQMTDIVILVVAADDGVMDQTREAISHSKAAGVPIVVAVNKMDKEG
ANPDNVKRELAEQGLSPEDWGGETIFAHVSAKKKEGLDELLEMVLLQAEVLELKANPDKP
ARGHIVEARLDKGRGPMGTMLISEGTINQGDSFVSGVHFGKVRAMFNDQGKKLKSAGPAM
PIEIQGFDGLPEAGDELFVVADEKVARRIANSRAMKKREKILSSKSKVTLESFLASKPND
ESQTLNLVLKADVQGSLEAVTEALNKLSTDEIKIDVVHGGAGAITESDILLAGASEAIIL
GFNVRPNLKVKEIAEHEGVEVRFYDIIYKLVQEVKDAMSGMLTPDIEEVYLGQAEVRQTF
SVPKIGLIAGCYIPDGKITRGAQVRLLRDGVVIYTGQVSSLRREKDDVREVAKGYECGIG
LEKFNDIKVGDAIEAFETKEVARTID
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgacggcaaaggttcgggtagaagacttggctgttgagctcaaactcagcaacaaggag
atcattcagcaacttcgtgaaatcggcgtccaggccaaaagccaaaagactgtcgtggaa
gacgaagatgtggaccgcctcaaggcggaaatgaagaaaggcggttccggcaagcgcgaa
gtccgtcgtgtgagcgactctggtgtcattattcgacgcagacgcaataaatccaaggct
cccaaggaagaagaagccgcaaccccgatcgaggatacggtcgaggaagtggtggagact
cccgtcgaggaagtggcagaaactcctgtgaaggaagaagccgcacctgtaaaggaagcc
aaagaacccaaggcagaaaaaaaacctgccaaaaagaaggctcccaaaaaggctgccccc
caggtcaaggtgattaagcctgccgtggaggaaaagcctgaggagatcaaggccgaggtt
gtagaaaccccggttccggaagcagtggttgaagaggccgcccccgaacccgtgcctgaa
aaaaccgaagctgctcccaaagctgaagccaaggaagaagcccccgccgagcctgtagaa
aaagctaagcccgctcaaaaagctgaaaagccaaaaaaagcggaaaagaaagcccctgcc
gaaaaaacggcaaaggatgaggttgcggccaaagcggaacccaaaaagaaaaagaaaaag
aaaagagagccagaagctcctaaagttaagatcatttccatgcccaccgaggcggaagtc
caggctcgtgcggctgccaaaatggcccagcctgaacgtcgtcccggcggtcgtcctggt
ggtggtcgtcccggtggaggtcgcccaggtggcggtcgtcctggtgcaggtcgtcctggt
gcaggtcgcccaggtggcggtcgtcccgataatcgtcctggtggtggtcgcccagctggc
gctcgtcctggtggcggtcgtcccggtaccgcacctgctccgaatcctgcactgcctgat
ggtcgtagcaagaaaaagcagggtaagaaacgtcgtgtcgtagaatttggtgctggcggt
aacgatcgtagcaacaaaaacttcaacgatggcttccctcagggacgcaaaggccgtaag
aaaaaaggccgtaagaaccaaactcctcagcacgagcaggttcaggcgcagcccatgaag
gcagcaaagcgcaagatcaaattcgatgagaccatccgtcttgcggatatggctcatcag
atgggcatcaaggctcaggacctcattaaggcattgttcacaatgggtgtcatggccacg
atcaaccaatcccttgatctggacactgcaactctgcttgcaagcgaattcggttacgaa
gtggaaaacgtctcctttgacgaacaggaattccttgttcccaccgaggctgataaagac
gaagatctcaaaccgcgtccccctgtggttaccatcatgggtcacgttgaccatggtaag
acctcactgctggatgccatccgtctgtcccatgtgactgacggcgaggctggcggcatc
acgcagcatatcggcgcataccacgtcaatacagctcgcggcgaagtcgtattccttgat
acccccggtcacgaagcctttaccaccatgcgtatgcgtggcgcacaaatgacggatatc
gtcatcttggttgttgctgccgacgatggcgtcatggatcaaacccgtgaggccatcagc
cactccaaagcggctggcgttcccatcgtggttgccgtcaacaagatggataaagaaggc
gcgaaccccgataacgtcaagcgtgaattggccgaacagggcctctcccctgaagactgg
ggtggtgagaccattttcgctcatgtttccgcaaagaaaaaagaaggcctcgacgaattg
ctcgagatggtcctgctccaggcagaagttctggaactcaaggccaacccggacaaaccc
gctcgcggtcatattgtcgaagcgcgtctggacaagggccgcggtcccatgggcaccatg
ctcatctccgaaggtaccatcaatcagggcgacagctttgtgtcaggtgtccactttggt
aaagtccgggccatgttcaacgatcaaggcaagaaactcaaaagcgccggaccggccatg
cctatagaaatccaaggctttgacggcctgcccgaagccggtgacgagttatttgttgtg
gcagacgagaaagtcgcccgccgcatcgccaactcccgtgccatgaagaaacgtgagaag
attctctcctccaagtccaaggttaccttggaatccttcctggcaagcaagcccaacgac
gaaagtcagactttgaacctcgtgctcaaggcagacgttcagggttcattggaagccgtc
accgaagcgctgaacaagctctccaccgacgaaatcaagatcgacgtcgtccacggcggt
gccggtgccatcactgaatccgacatccttctggccggtgcgtccgaagccattattctc
ggcttcaacgttcgtccgaatctgaaggtcaaggaaattgccgagcacgaaggcgttgaa
gtccgcttctacgacatcatctacaagttggtgcaagaagtgaaagacgctatgagcggc
atgctcacaccggacatcgaagaagtatacttgggtcaggcggaagttcgccagaccttc
agcgtaccgaagatcggtctcatcgccggttgctacatcccggacggcaagatcacccgc
ggcgctcaggttcgcctgctccgcgacggtgttgtcatctacaccggccaggtttcttcc
ctgcgccgcgaaaaggacgatgttcgcgaagttgccaagggctacgaatgcggtatcggc
ctcgagaaattcaacgacatcaaagtcggcgatgccatcgaagccttcgaaaccaaagaa
gtcgctcgtaccatcgactag
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