Pseudodesulfovibrio nedwellii: SYK_00990
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Entry
SYK_00990 CDS
T09024
Name
(GenBank) cytochrome c-type protein
KO
K03532
trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00680
Methane metabolism
pnw01100
Metabolic pathways
pnw01120
Microbial metabolism in diverse environments
pnw02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
SYK_00990
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SYK_00990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnw02000
]
SYK_00990
Transporters [BR:
pnw02000
]
Other transporters
Transmembrane electron carriers [TC:
5
]
SYK_00990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cytochrom_NNT
Cytochrome_C7
Cytochrom_c3_2
Cytochrom_CIII
SH3_3
Cytochrome_C554
DHC
Motif
Other DBs
NCBI-ProteinID:
BDQ35739
LinkDB
All DBs
Position
111505..112662
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AA seq
385 aa
AA seq
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MEKGFGARIGKHQWLLLAGICLGGVLLISAAVGAGSEGDEDEGNSLCLSCHVMEQTVYPE
FKKTKHFNNSSGVRAKCSSCHVPQPLIPMLERKAASVSEIFSWMAGTIDTPEKFEENRLR
LAKSVWADFKESDSRECKSCHNVTAFDFTAFKKPESAKTMQKGLQDGQTCIDCHKGIAHT
MPDLSAGFRMLYEEIQSEAKNGDFDVEAVYPISVASCFLEKDGSKAGRLLPLTKLEVLET
SGDWAKVRVRGWQQIGAERVICEAQGRRVFAAALSKKVLDTVKGGEPMVDPETGQSWRKA
EFDCWIKVGEFVADIDRLNNYGSELHAATCGGCHAQTPASHFTANQWIGGIKSMGNRVSL
DKNNYRLLLKYLQMRASDVTGETHS
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagggattcggtgccaggattggcaaacatcagtggctcctgcttgccggaata
tgtctgggaggggtgttacttatttctgccgccgtaggggccgggtcagaaggtgatgag
gatgaaggaaatagtttgtgtctatcgtgtcatgtcatggaacaaacagtgtatcctgag
ttcaaaaaaacaaaacattttaacaactcgtcaggtgttcgagccaagtgctcatcctgc
catgtgccgcaacccctgatacccatgttggaaagaaaggccgcatcggtttccgaaata
ttcagttggatggctggcaccattgatactcctgaaaaatttgaagaaaatagactgaga
cttgcaaaaagtgtgtgggctgattttaaagaaagcgattctcgcgaatgcaaatcctgc
cacaatgtcactgcttttgattttacagctttcaagaagccggaatctgctaagacgatg
caaaagggcttgcaggatgggcagacgtgtattgattgccataaaggtattgcccatacc
atgccggacctctctgccggatttagaatgttgtatgaagaaatccaaagtgaggccaag
aacggcgactttgatgtcgaggcagtttatccaatcagtgtcgccagttgctttcttgaa
aaagatggctccaaagctggcagacttcttccccttaccaaacttgaagtactcgaaaca
tccggtgactgggccaaagtccgtgttcgtggttggcagcagatcggggctgaacgcgtc
atttgtgaagctcaggggcggcgtgttttcgcggctgccctgagtaagaaagtgctcgat
acagtcaaaggcggagaacccatggttgaccctgaaaccgggcaatcatggcgtaaggct
gaattcgactgctggataaaggttggagaattcgtggctgatattgaccggttgaacaac
tacggcagtgaacttcatgcggcaacgtgtggtggatgccatgcacagacaccggccagt
cattttacggccaatcagtggattggcggcatcaaatcgatgggcaacagagtgtcattg
gacaagaataattatcggcttttgctgaaatatctccagatgagagcatctgatgtcacc
ggagagactcattcataa
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