Pseudodesulfovibrio nedwellii: SYK_11470
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Entry
SYK_11470 CDS
T09024
Symbol
tag
Name
(GenBank) DNA-3-methyladenine glycosylase I
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SYK_11470 (tag)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnw03400
]
SYK_11470 (tag)
Enzymes [BR:
pnw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
SYK_11470 (tag)
DNA repair and recombination proteins [BR:
pnw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SYK_11470 (tag)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-ProteinID:
BDQ36787
LinkDB
All DBs
Position
1217551..1218108
Genome browser
AA seq
185 aa
AA seq
DB search
MAKFNSYCEACWTFDKTDVDKIYHDTQYGFPIEDDNELFGRLILEINQAGLSWRTILNKQ
ENFLKAYDQYDIETIANYEDEDRSRLLSDAGIIRNRLKIGAAIHNAKAILILKKEYGSFK
GWLDTHHPLSKEEWVKLFKKHFKFVGGEIVNEFLMSSGYLHGAHIESCPTYQKILNKNPA
WATIK
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggctaaattcaactcatattgtgaagcatgttggactttcgacaaaactgatgtggac
aaaatatatcacgacactcaatacggttttcccattgaggatgacaacgaactgttcgga
aggcttatcctggagatcaatcaagccggactgagttggcgtaccattctcaataaacag
gaaaattttctaaaagcgtatgaccagtacgatatcgaaactatcgccaattatgaagat
gaagacagatcgcgtctgctcagcgatgccggaatcattcgcaaccgtttgaaaatcggt
gctgccattcacaacgcaaaagctattcttattttaaaaaaggaatatggctccttcaaa
ggctggctggacacacatcacccactcagtaaagaagaatgggtcaaattattcaaaaag
catttcaaattcgttggtggagaaattgtcaatgaattcttgatgagtagcggttatcta
cacggtgcacacattgaatcttgccccacgtatcaaaaaatactcaataaaaatcctgcc
tgggccacaataaaataa
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